Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0447.Seq
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016452-11|AAB66012.1| 443|Caenorhabditis elegans Hypothetical... 139 2e-33
J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein ( C.ele... 31 0.53
AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kina... 31 0.53
Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC024799-9|AAK72312.1| 293|Caenorhabditis elegans Hypothetical ... 29 2.8
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 29 2.8
AL132949-35|CAI70419.1| 466|Caenorhabditis elegans Hypothetical... 28 5.0
AL132949-34|CAB61101.3| 574|Caenorhabditis elegans Hypothetical... 28 5.0
AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical ... 28 6.6
Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AF016452-11|AAB66012.1| 443|Caenorhabditis elegans Hypothetical
protein T05H4.6 protein.
Length = 443
Score = 139 bits (336), Expect = 2e-33
Identities = 70/98 (71%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
Frame = +1
Query: 346 ESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTVL-ISS 522
+ +ADRNVE+WKIK+LIKSLE+ARGNGTSMISLIIPPKDQ++R+ +MLA+E+GT I S
Sbjct: 13 DDAADRNVEMWKIKRLIKSLELARGNGTSMISLIIPPKDQVARIQRMLAEEYGTASNIKS 72
Query: 523 HV*IVSPVLGAITSVQHRLKLYTKVPPNGLVISXGTIV 636
V +S VLGAITSVQ RLKLY KVPPNGLV+ GTI+
Sbjct: 73 RVNRLS-VLGAITSVQGRLKLYNKVPPNGLVVYCGTIM 109
>J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein (
C.elegans casein kinaseII-alpha gene, complete cds. ).
Length = 360
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 379 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKML 489
KIK+ IK LE RG GT++I+L+ KD ISR ++
Sbjct: 76 KIKREIKILENLRG-GTNIITLLDVVKDPISRTPALI 111
>AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kinase
protein 3 protein.
Length = 360
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 379 KIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKML 489
KIK+ IK LE RG GT++I+L+ KD ISR ++
Sbjct: 76 KIKREIKILENLRG-GTNIITLLDVVKDPISRTPALI 111
>Z71186-4|CAA94916.1| 867|Caenorhabditis elegans Hypothetical
protein F23D12.5 protein.
Length = 867
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 375 MEDKETYKEFGNGQRKWNIDDIPDHSTXGSNLESIKDVG 491
M DK T + GN ++ + + N ES+KD+G
Sbjct: 476 MNDKNTVQRLGNAWAVFDFEGVTQLRDFAKNYESLKDIG 514
>AC024799-9|AAK72312.1| 293|Caenorhabditis elegans Hypothetical
protein Y49C4A.1 protein.
Length = 293
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 148 HFLVYIYVCGCSDFSSCAGILGFFLI 71
HFL+ CS+ ++C I+ FF++
Sbjct: 79 HFLIVYLALPCSNIAACRSIIAFFIV 104
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 319 NKKRNKMSEESSADRNVEIWKIKKLIKSLEMARGNGTSMISLI 447
NKKR++ S+++ +N EI +KK + SL ++ +M S I
Sbjct: 124 NKKRDEASKKTLNSKNEEIEHLKKRVISLSNSQSENETMKSKI 166
>AL132949-35|CAI70419.1| 466|Caenorhabditis elegans Hypothetical
protein Y53F4B.27b protein.
Length = 466
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +2
Query: 50 HMLRGNRNKKKSKNPRTRRKVRAT 121
H ++GN KK++K+ +TR+K R++
Sbjct: 84 HEVQGNVTKKRTKHSKTRQKARSS 107
>AL132949-34|CAB61101.3| 574|Caenorhabditis elegans Hypothetical
protein Y53F4B.27a protein.
Length = 574
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +2
Query: 50 HMLRGNRNKKKSKNPRTRRKVRAT 121
H ++GN KK++K+ +TR+K R++
Sbjct: 192 HEVQGNVTKKRTKHSKTRQKARSS 215
>AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical
protein Y51A2D.12 protein.
Length = 334
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 2 FVQRHLLFL*CLNFVFHMLRG----NRNKKKSKNPRT 100
F+ L+FL C N VF++L G N KK K P T
Sbjct: 184 FLMPALIFLTCFNIVFNVLAGIRLYNMKKKGVKVPET 220
>Z50742-5|CAA90618.2| 650|Caenorhabditis elegans Hypothetical
protein K09A11.5 protein.
Length = 650
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/26 (38%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +2
Query: 518 QVTCESSLQCLAQLLLY-STDSSCIL 592
+ TC++S +C++QLL Y + +CI+
Sbjct: 605 EFTCQNSCKCVSQLLSYPKAEKTCII 630
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,246,282
Number of Sequences: 27780
Number of extensions: 313894
Number of successful extensions: 808
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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