Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0446.Seq
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    36   4e-04
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    29   0.027
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.6  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = +2

Query: 401 TSLRDPAFYQLYNRIVEYIVEFKQYLKPYTQDKLNF 508
           T++RDP FY+ ++ I +   E+K  L  YT+++LN+
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYKATLPRYTENQLNY 427


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 407 LRDPAFYQLYNRIVEYIVEFKQYLKPYTQDKLNF 508
           LRDP F++ +  I +   EFK  L  YT  +LN+
Sbjct: 394 LRDPLFFRWHAYIDDMFQEFKATLPRYTVAQLNY 427


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +1

Query: 265 CRSVWRRSHKRLPTFLRSICAPCARCCAYAIRQVH 369
           C ++W  + + +  FL+S+       C++ I + H
Sbjct: 538 CGTMWHETPEEMMEFLKSVFRLDQDQCSHRIVREH 572


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +1

Query: 265 CRSVWRRSHKRLPTFLRSICAPCARCCAYAIRQVH 369
           C ++W  + + +  FL+S+       C++ I + H
Sbjct: 538 CGTMWHETPEEMMEFLKSVFRLDQDQCSHRIVREH 572


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,239
Number of Sequences: 336
Number of extensions: 3528
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)