Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0446.Seq
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z92806-8|CAJ43452.1|  307|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL021501-3|CAJ43442.1|  307|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z99942-1|CAB17068.2|  454|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z46787-6|CAA86744.1|  392|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical...    28   7.3  
Z69634-1|CAA93450.2|  271|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AC006665-2|AAF39904.1|  341|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical
           protein C43F9.6 protein.
          Length = 374

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 335 LGAAPMPFDKYTFMPSAMDFYQTSLRDPAFYQLY--NRIVEYIVEFKQYLKPYT 490
           LG AP    K +F P+   F +   ++   + +Y  +  V Y++ +KQ LK Y+
Sbjct: 146 LGGAP----KVSFDPNPRQFLEDGTKNAMSWNIYEFSTYVNYLIRYKQVLKKYS 195


>Z92806-8|CAJ43452.1|  307|Caenorhabditis elegans Hypothetical
           protein Y61B8A.4 protein.
          Length = 307

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -3

Query: 547 GKLTTLTSVS*HHKVKFVLSVRLQVLLELNDVFHNSVVELIESRITKRSLVKV 389
           G L  L  +      K V+++  Q LL++ ++FH    +L   RI++  LVK+
Sbjct: 187 GPLDALVPLDQWKMAKSVIALDKQSLLDIGNIFHLHQFKLQLVRISREELVKI 239


>AL021501-3|CAJ43442.1|  307|Caenorhabditis elegans Hypothetical
           protein Y61B8A.4 protein.
          Length = 307

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -3

Query: 547 GKLTTLTSVS*HHKVKFVLSVRLQVLLELNDVFHNSVVELIESRITKRSLVKV 389
           G L  L  +      K V+++  Q LL++ ++FH    +L   RI++  LVK+
Sbjct: 187 GPLDALVPLDQWKMAKSVIALDKQSLLDIGNIFHLHQFKLQLVRISREELVKI 239


>Z99942-1|CAB17068.2|  454|Caenorhabditis elegans Hypothetical
           protein H13N06.2 protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 169 SSSKRTTLKPSDKKLISTTRKPLTSSATTA 258
           SS   TT+ P    + +TT KP+T   TT+
Sbjct: 217 SSEFTTTMTPESSSVTTTTAKPVTEPITTS 246


>Z46787-6|CAA86744.1|  392|Caenorhabditis elegans Hypothetical
           protein C16C10.6 protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 204 QKIDFHDPKAINFVGNYGKIMQICMEKKSQ 293
           QK +  DP   ++ GNY +I  I  EKK +
Sbjct: 61  QKAEAEDPTIFDYDGNYDEIQAIKNEKKEE 90


>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
           protein Y48G9A.1 protein.
          Length = 1725

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -3

Query: 439 VVEL-IESRITKRSLVKVHCTRHESV 365
           VVEL IE  I+K  LV++H  RH+ +
Sbjct: 145 VVELGIEQSISKEILVRIHVARHDPI 170


>Z69634-1|CAA93450.2|  271|Caenorhabditis elegans Hypothetical
           protein B0001.1 protein.
          Length = 271

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 9   PEFSWYSPIKTGYYPLMLTKFTPFAQRPDYYNLHTEENYE 128
           P++S + P  +  Y L  + +T    RP  Y+  TE   E
Sbjct: 56  PQYSHFQPAGSKPYTLFKSVYTNSTNRPQEYSFKTERTTE 95


>AC006665-2|AAF39904.1|  341|Caenorhabditis elegans Hypothetical
           protein H27M09.5 protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 169 SSSKRTTLKPSDKKLISTTRKPLTSSATTAR*CRSVWRRSHKR 297
           S   + + K S KKLIST + P T S  +A+  R+  +   KR
Sbjct: 269 SPGDKKSAKISTKKLISTIKPPKTLSKKSAKSTRNPLKSPSKR 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,708,886
Number of Sequences: 27780
Number of extensions: 333826
Number of successful extensions: 986
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)