Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0445.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20385| Best HMM Match : No HMM Matches (HMM E-Value=.) 139 2e-33
SB_19150| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_19635| Best HMM Match : Met_10 (HMM E-Value=3.4e-13) 33 0.17
SB_34114| Best HMM Match : Transthyretin (HMM E-Value=1.1e-13) 31 1.2
SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38) 31 1.2
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 29 2.7
SB_14110| Best HMM Match : DUF858 (HMM E-Value=2) 29 2.7
SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_52566| Best HMM Match : Baculo_FP (HMM E-Value=1.7) 29 4.8
SB_46729| Best HMM Match : DUF646 (HMM E-Value=1.9) 28 6.3
SB_39887| Best HMM Match : DUF1127 (HMM E-Value=3.2) 28 6.3
SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18) 28 6.3
SB_54513| Best HMM Match : Mod_r (HMM E-Value=0.23) 28 6.3
SB_27389| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_6471| Best HMM Match : HALZ (HMM E-Value=7) 28 6.3
SB_936| Best HMM Match : DUF1127 (HMM E-Value=3.2) 28 6.3
SB_48988| Best HMM Match : DUF1127 (HMM E-Value=1.5) 28 8.4
SB_2355| Best HMM Match : Carn_acyltransf (HMM E-Value=0) 28 8.4
SB_11793| Best HMM Match : REX1 (HMM E-Value=3.8) 28 8.4
>SB_20385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 139 bits (337), Expect = 2e-33
Identities = 62/116 (53%), Positives = 83/116 (71%), Gaps = 2/116 (1%)
Frame = +1
Query: 256 KATRLEKDAKRHWDLFYKRNETKFFRDRHWTTREFQELINFDPEQ--QIVYLELGCGVGN 429
K +LE+DA+++WDLFYKRN T FF+DR WTTREF EL+N + E+ + V LE GCGVGN
Sbjct: 388 KRNKLEQDARKNWDLFYKRNSTNFFKDRRWTTREFTELLNVEDEKLNEKVLLEAGCGVGN 447
Query: 430 MIFPLVEEGFTNFFFYACDFSPRAVELSKRNSLYDKNRXKGFRC*LNHRXXIRKLP 597
+I PL+EEG+ NF+F+ACDFSPRAV K + YD+ + F+C L + +P
Sbjct: 448 LINPLLEEGY-NFYFHACDFSPRAVNFVKESPFYDEAKVNAFQCDLTKDDLLENIP 502
>SB_19150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +1
Query: 346 TTREFQELINFDPEQQIVYLELGCGVGNMIFPLVEEGFTNFFFYACDFSPRAVELSKRNS 525
TT+EF E++N P Q++ L++GCG+G F +++ A D S +E+ K+ +
Sbjct: 42 TTKEFVEMLNLAPGQKV--LDVGCGIGGSAFYMIKNFHVE--VRAVDLSTNMIEIGKQRA 97
>SB_19635| Best HMM Match : Met_10 (HMM E-Value=3.4e-13)
Length = 564
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 397 VYLELGCGVGNMIFPLVEEGFTNFFFYACDFSPRAVELSKRNSLYDKNRXK 549
V ++L G+G + P + F +AC+++P AVE +RN + +K K
Sbjct: 227 VIVDLFAGIGYFVLPFLVHA-NAAFVHACEWNPHAVEALRRNLVQNKVNEK 276
>SB_34114| Best HMM Match : Transthyretin (HMM E-Value=1.1e-13)
Length = 626
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 149 VEETSSSDTFVHRLKELSQEEI-KLLQNQNTRLVPEAKR 262
VE + SD+F+ R + S+EEI +LL+ ++TR +A R
Sbjct: 31 VESPTCSDSFLGRFGDSSEEEIQRLLEERSTRNTKKANR 69
>SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38)
Length = 1354
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 71 FI*LHNLDKVTYIKNRIKMETDIPAHV-EETSSSDTFVHRLKELSQEEIKLLQNQNTRLV 247
F LHN+ +++ R K+E +PA V + ++ L E +++ +QN RL+
Sbjct: 253 FFWLHNIKRISQFLARDKVEMVLPAFVTSRIDYCNGLLYGLPEREMGKLQRVQNAAARLL 312
Query: 248 PEAKRLD 268
K+ D
Sbjct: 313 TSCKKHD 319
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 206 LVTVLSACERMCHCCLFLQH 147
L+ V C R+C+CCLF H
Sbjct: 168 LIYVTQWCRRVCYCCLFDSH 187
>SB_14110| Best HMM Match : DUF858 (HMM E-Value=2)
Length = 207
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +1
Query: 349 TREFQELINFDPEQQIVYLELGCGVGNMIFPLVEEGFTNFFFYACDFSPRAVELSKRNSL 528
T +F + F + +I L++G G G LV+ GFTN A D S ++ E++++ +L
Sbjct: 55 TAKFLKSQGFSEDCRI--LDVGSGTGLQAEGLVKHGFTN--IDALDPSEKSHEVARKKNL 110
Query: 529 Y 531
Y
Sbjct: 111 Y 111
>SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/65 (27%), Positives = 38/65 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAKRLDW 271
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K +
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDMLTKKVKFLESRNTSLETENKLI-- 72
Query: 272 KKMLN 286
K+ LN
Sbjct: 73 KRELN 77
>SB_52566| Best HMM Match : Baculo_FP (HMM E-Value=1.7)
Length = 350
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 16 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILSKKVKFLESRNTSLETENK 68
>SB_46729| Best HMM Match : DUF646 (HMM E-Value=1.9)
Length = 202
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKKVKFLESRNTSLETENK 70
>SB_39887| Best HMM Match : DUF1127 (HMM E-Value=3.2)
Length = 224
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDMLTKKVKFLESRNTSLETENK 70
>SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)
Length = 521
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 257 LLRVQDVYFDFVRALFLLVTVLSACERMCHC 165
+LRV V +R +F+ + VL C R C C
Sbjct: 87 ILRVMFVSLYILRVMFVSLFVLCTCHRACSC 117
>SB_54513| Best HMM Match : Mod_r (HMM E-Value=0.23)
Length = 603
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 416 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKKVKFLESRNTSLETENK 468
>SB_27389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKKVKFLESRNTSLETENK 70
>SB_6471| Best HMM Match : HALZ (HMM E-Value=7)
Length = 108
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKKVKFLESRNTSLETENK 70
>SB_936| Best HMM Match : DUF1127 (HMM E-Value=3.2)
Length = 280
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKKVKFLESRNTSLETENK 70
>SB_48988| Best HMM Match : DUF1127 (HMM E-Value=1.5)
Length = 270
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ + +K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKNVKFLESRNTSLETENK 70
>SB_2355| Best HMM Match : Carn_acyltransf (HMM E-Value=0)
Length = 1559
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 277 DAKRHWDLFYKRNETKFFRDRHWTTREFQELINFDPEQQIVY 402
D K+HW L + E K +D+ + T E +INF + Y
Sbjct: 889 DPKKHWSLMCEAAEPKSPKDKDFWTEE--HIINFTVSALVEY 928
>SB_11793| Best HMM Match : REX1 (HMM E-Value=3.8)
Length = 218
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 277 DAKRHWDLFYKRNETKFFRDRHWTTREFQELINFDPEQQIVY 402
D K+HW L + E K +D+ + T E +INF + Y
Sbjct: 173 DPKKHWSLMCEAAEPKSPKDKDFWTEE--HIINFTVSALVEY 212
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,273,792
Number of Sequences: 59808
Number of extensions: 338266
Number of successful extensions: 979
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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