Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0445.Seq
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26200.1 68415.m03146 expressed protein 101 3e-22
At1g54650.1 68414.m06232 expressed protein similar to Actin-bind... 56 2e-08
At3g18000.1 68416.m02288 phosphoethanolamine N-methyltransferase... 33 0.14
At1g73600.2 68414.m08520 phosphoethanolamine N-methyltransferase... 32 0.42
At1g73600.1 68414.m08521 phosphoethanolamine N-methyltransferase... 32 0.42
At4g04670.1 68417.m00683 Met-10+ like family protein / kelch rep... 31 0.56
At1g66680.1 68414.m07579 S locus-linked protein, putative simila... 29 2.2
At5g58000.1 68418.m07256 phosphatase-related weak similarity to ... 29 3.0
At1g48600.2 68414.m05434 phosphoethanolamine N-methyltransferase... 29 3.9
At1g48600.1 68414.m05435 phosphoethanolamine N-methyltransferase... 29 3.9
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 28 5.2
At1g19370.1 68414.m02410 expressed protein 28 6.8
At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At3g58230.1 68416.m06492 hypothetical protein 27 9.0
>At2g26200.1 68415.m03146 expressed protein
Length = 565
Score = 101 bits (243), Expect = 3e-22
Identities = 46/99 (46%), Positives = 64/99 (64%)
Frame = +1
Query: 265 RLEKDAKRHWDLFYKRNETKFFRDRHWTTREFQELINFDPEQQIVYLELGCGVGNMIFPL 444
+ E+DAK++WD+FYK + +FF+DRH+ +E+ F + V LE+GCG GN IFPL
Sbjct: 35 KYERDAKKYWDIFYKHHGDRFFKDRHYLDKEWNSY--FSVSGKSVILEVGCGAGNTIFPL 92
Query: 445 VEEGFTNFFFYACDFSPRAVELSKRNSLYDKNRXKGFRC 561
+ + + F YACDFSPRAVEL K + Y + R F C
Sbjct: 93 IAT-YPDIFVYACDFSPRAVELVKAHDEYTETRVCAFAC 130
>At1g54650.1 68414.m06232 expressed protein similar to Actin-binding
protein ABP140 (Swiss-Prot:Q08641) [Saccharomyces
cerevisiae]
Length = 299
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 292 WDLFYKRNET-KFFRDRHWTTREFQELINFDPEQQIVYLELGCGVGNMIFPLVEEGFTNF 468
W F+ R+ + KFF++R + +EF EL++ ++ LE+GCG G+ + P++ G N
Sbjct: 51 WQDFHSRHSSGKFFKERRYLLKEFPELVSCGENSKL--LEIGCGNGSTVLPIL-RGSKNI 107
Query: 469 FFYACDFSPRAVELSKRN 522
YACD S A+ +K N
Sbjct: 108 TVYACDCSSDALVRTKEN 125
>At3g18000.1 68416.m02288 phosphoethanolamine N-methyltransferase 1
/ PEAMT 1 (NMT1) identical to Phosphoethanolamine
N-methyltransferase 1 (EC 2.1.1.103) (PEAMT 1) (AtNMT1)
(SP:Q9FR44){Arabidopsis thaliana}; strong similarity to
phosphoethanolamine N-methyltransferase from [Spinacia
oleracea] GI:7407189, [Triticum aestivum] GI:17887465;
contains Pfam profile PF01209: methlytransferase,
UbiE/COQ5 family
Length = 491
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 346 TTREFQELINFDPEQQIVYLELGCGVGNMIFPLVEE 453
TT+EF E +N P Q++ L++GCG+G F + E+
Sbjct: 270 TTKEFVEKMNLKPGQKV--LDVGCGIGGGDFYMAEK 303
>At1g73600.2 68414.m08520 phosphoethanolamine N-methyltransferase 3,
putative (NMT3) strong similarity to SP|Q9FR44
Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)
(PEAMT 1) (AtNMT1) {Arabidopsis thaliana}; identical to
SP|Q9C6B9 Putative phosphoethanolamine
N-methyltransferase 3 {Arabidopsis thaliana}
Length = 376
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 346 TTREFQELINFDPEQQIVYLELGCGVGNMIFPLVE 450
TT+EF ++++ P Q++ L++GCG+G F + E
Sbjct: 283 TTKEFVDMLDLKPGQKV--LDVGCGIGGGDFYMAE 315
>At1g73600.1 68414.m08521 phosphoethanolamine N-methyltransferase 3,
putative (NMT3) strong similarity to SP|Q9FR44
Phosphoethanolamine N-methyltransferase 1 (EC 2.1.1.103)
(PEAMT 1) (AtNMT1) {Arabidopsis thaliana}; identical to
SP|Q9C6B9 Putative phosphoethanolamine
N-methyltransferase 3 {Arabidopsis thaliana}
Length = 555
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 346 TTREFQELINFDPEQQIVYLELGCGVGNMIFPLVE 450
TT+EF ++++ P Q++ L++GCG+G F + E
Sbjct: 334 TTKEFVDMLDLKPGQKV--LDVGCGIGGGDFYMAE 366
>At4g04670.1 68417.m00683 Met-10+ like family protein / kelch
repeat-containing protein contains Pfam profiles
PF01344: Kelch motif, PF02475: Met-10+ like-protein
Length = 995
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 373 NFDPEQQIVYLELGCGVGNMIFPLVEEGFTNFFFYACDFSPRAVELSKRN 522
N E ++V ++L G+G + P + YAC+++P A+E +RN
Sbjct: 833 NMACENEVV-VDLFAGIGYFVLPFLVRAKAKLV-YACEWNPHAIEALRRN 880
>At1g66680.1 68414.m07579 S locus-linked protein, putative similar
to S locus-linked protein SLL2 [Brassica napus]
GI:1518113
Length = 358
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 403 LELGCGVGNMIFPLVEEGFTNFFFYACDFSPRAVELSKRNSLYD 534
L+LG G G ++ L +EGF++ D+S AVEL++ S D
Sbjct: 174 LDLGTGNGLLLHQLAKEGFSD--LTGTDYSDGAVELAQHLSQRD 215
>At5g58000.1 68418.m07256 phosphatase-related weak similarity to CTD
phosphatase-like 3 [Arabidopsis thaliana] GI:22212705;
contains Pfam profiles PF02453: Reticulon, PF00533:
BRCA1 C Terminus (BRCT) domain, PF03031: NLI interacting
factor
Length = 1011
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +2
Query: 149 VEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAKRL 265
+EET S ++H+ L+++EI L++ ++R + ++L
Sbjct: 656 LEETGVSFRYIHKEMRLNEDEISRLRDSDSRFLQRQRKL 694
>At1g48600.2 68414.m05434 phosphoethanolamine N-methyltransferase 2,
putative (NMT2) very similar to |PEM2_ARATH Putative
phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103)
(SP:Q944H0){Arabidopsis thaliana}; very similar to
Halotolerance protein Hal3b (SP:P94063)[Arabidopsis
thaliana]; to similar to GB:AAF61950 from [Spinacia
oleracea]
Length = 491
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 346 TTREFQELINFDPEQQIVYLELGCGVGNMIFPLVE 450
TT+EF ++ P Q++ L++GCG+G F + E
Sbjct: 270 TTKEFVAKMDLKPGQKV--LDVGCGIGGGDFYMAE 302
>At1g48600.1 68414.m05435 phosphoethanolamine N-methyltransferase 2,
putative (NMT2) very similar to |PEM2_ARATH Putative
phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103)
(SP:Q944H0){Arabidopsis thaliana}; very similar to
Halotolerance protein Hal3b (SP:P94063)[Arabidopsis
thaliana]; to similar to GB:AAF61950 from [Spinacia
oleracea]
Length = 475
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 346 TTREFQELINFDPEQQIVYLELGCGVGNMIFPLVE 450
TT+EF ++ P Q++ L++GCG+G F + E
Sbjct: 254 TTKEFVAKMDLKPGQKV--LDVGCGIGGGDFYMAE 286
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Frame = +1
Query: 247 TRSKATRLEKDAKRHWDLFYKRNETKFF-------RDRHWTTREFQELINFDPEQQIVYL 405
TR E+ KR W + + R E + + W TR+ +IN D + I +
Sbjct: 452 TRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKANICCV 511
Query: 406 ELGCGVGNMI 435
+ G N I
Sbjct: 512 KYNPGSSNYI 521
>At1g19370.1 68414.m02410 expressed protein
Length = 605
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 125 METDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRL 244
+ TD+ V ET+ +H L+EL + +L+ N + +L
Sbjct: 39 VSTDVAVSVSETNREAVLLHNLEELVKNLTELVANLDAKL 78
>At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger proteins
RHG1a [Arabidopsis thaliana] GI:3822225, RHY1a
[Arabidopsis thaliana] GI:3790593; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 202
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 146 HVEETSSSDTFVHRLKELSQEEIK 217
HVEETSS ++ + RL + EE+K
Sbjct: 121 HVEETSSKESRMVRLGSMKAEELK 144
>At3g58230.1 68416.m06492 hypothetical protein
Length = 153
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 191 KELSQEEIKLLQNQNTRLVPEAKRLDWKKMLNAIGIYFTKETKQNSSG 334
+EL++EEI+ +N LV +LDW K N + K+ K + G
Sbjct: 64 QELTEEEIRNAENTLLELVEVGFKLDWLK--NRLEELCVKKKKMEARG 109
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,753,567
Number of Sequences: 28952
Number of extensions: 234739
Number of successful extensions: 658
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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