Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0444.Seq
(497 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 36 0.016
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 36 0.016
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 36 0.022
AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical ... 29 1.4
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 5.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 5.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 5.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 5.7
AC024817-29|AAK68530.1| 280|Caenorhabditis elegans C-type lecti... 27 5.7
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 35.9 bits (79), Expect = 0.016
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +2
Query: 266 EADYFGLRVCPGSGPGXWLNLRNPLDPHRI--PGGRLDLRVKFWV--PPHLLINEPTRHQ 433
E DYFGL+ WL+ + P L RVKF+ P L E TR+Q
Sbjct: 72 ERDYFGLQYTDPFNVQHWLDPTKKVAKQVAIGPPFTLRFRVKFFTSEPSSNLKEELTRYQ 131
Query: 434 FYLHAKLDLIEGSL*LAH 487
F+L K D+ G L H
Sbjct: 132 FFLQIKQDISSGRLQCPH 149
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.016
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +2
Query: 266 EADYFGLRVCPGSGPGXWLNLRNPLDPHRI--PGGRLDLRVKFWV--PPHLLINEPTRHQ 433
E DYFGL+ WL+ + P L RVKF+ P L E TR+Q
Sbjct: 88 ERDYFGLQYTDPFNVQHWLDPTKKVAKQVAIGPPFTLRFRVKFFTSEPSSNLKEELTRYQ 147
Query: 434 FYLHAKLDLIEGSL*LAH 487
F+L K D+ G L H
Sbjct: 148 FFLQIKQDISSGRLQCPH 165
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 35.5 bits (78), Expect = 0.022
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +2
Query: 266 EADYFGLRVCPGSGPGXWLNLRNPLDPHRIPGGRLDLR----VKFWVP-PHLLINEPTRH 430
E DYFGL +G WL+ R +I G D + VKF+ P P L E TR+
Sbjct: 82 ECDYFGLSFIDINGNHCWLD-REKTILRQITNGSTDAKFYFVVKFYTPNPIDLEEEYTRY 140
Query: 431 QFYLHAKLDLIEGSL 475
F + K DL G L
Sbjct: 141 LFTMQIKRDLALGEL 155
>AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical
protein Y71D11A.5 protein.
Length = 508
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 347 HRIPGGRLDLRVKFWVPPHLLINEPT 424
H+IPGG++D+ V+ WV I++ T
Sbjct: 80 HKIPGGQVDVEVEVWVQEITTISDIT 105
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 248 LAYLLKALLTNRIWVHLDFQDHRIRLTD*PHFGQHFERKYVKFNKSGRKIFSLMNLTHVT 69
L+ L LL N +WV + D + P + E Y K+ K +F++ + H
Sbjct: 2717 LSSLGACLLKNLMWVGIAEDDDTVEPGVLPVMLEWKETDYTKYRKMNEALFNIRIIKHPE 2776
Query: 68 I-VYLTRAKYLFKKVLLNSLCE 6
+ L R F+ + S E
Sbjct: 2777 LRAVLLRCSKRFRSIFKMSYAE 2798
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 248 LAYLLKALLTNRIWVHLDFQDHRIRLTD*PHFGQHFERKYVKFNKSGRKIFSLMNLTHVT 69
L+ L LL N +WV + D + P + E Y K+ K +F++ + H
Sbjct: 2714 LSSLGACLLKNLMWVGIAEDDDTVEPGVLPVMLEWKETDYTKYRKMNEALFNIRIIKHPE 2773
Query: 68 I-VYLTRAKYLFKKVLLNSLCE 6
+ L R F+ + S E
Sbjct: 2774 LRAVLLRCSKRFRSIFKMSYAE 2795
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 248 LAYLLKALLTNRIWVHLDFQDHRIRLTD*PHFGQHFERKYVKFNKSGRKIFSLMNLTHVT 69
L+ L LL N +WV + D + P + E Y K+ K +F++ + H
Sbjct: 2717 LSSLGACLLKNLMWVGIAEDDDTVEPGVLPVMLEWKETDYTKYRKMNEALFNIRIIKHPE 2776
Query: 68 I-VYLTRAKYLFKKVLLNSLCE 6
+ L R F+ + S E
Sbjct: 2777 LRAVLLRCSKRFRSIFKMSYAE 2798
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -1
Query: 248 LAYLLKALLTNRIWVHLDFQDHRIRLTD*PHFGQHFERKYVKFNKSGRKIFSLMNLTHVT 69
L+ L LL N +WV + D + P + E Y K+ K +F++ + H
Sbjct: 2714 LSSLGACLLKNLMWVGIAEDDDTVEPGVLPVMLEWKETDYTKYRKMNEALFNIRIIKHPE 2773
Query: 68 I-VYLTRAKYLFKKVLLNSLCE 6
+ L R F+ + S E
Sbjct: 2774 LRAVLLRCSKRFRSIFKMSYAE 2795
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 273 TISVCACAQDQAPEXGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 437
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1204 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1258
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 273 TISVCACAQDQAPEXGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 437
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1217 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1271
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 273 TISVCACAQDQAPEXGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 437
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1205 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1259
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 273 TISVCACAQDQAPEXGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSSTNRRGISS 437
T++V C+ A G + G PS A DG S ++ G P+ N + S
Sbjct: 1217 TVTVSVCSPSGASCSGYSTGGPSTPVACNSDGTGSPATIGSPVPQDLVNNDRVRS 1271
>AC024817-29|AAK68530.1| 280|Caenorhabditis elegans C-type lectin
protein 85 protein.
Length = 280
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 309 PEXGLTCGTPSIRTAYPEDG*TSASSSGCPLTCSS 413
P +T S T YP G T S+SG P++ S+
Sbjct: 246 PASSMTDSPASGATGYPASGATDYSASGAPVSAST 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,203,779
Number of Sequences: 27780
Number of extensions: 237991
Number of successful extensions: 581
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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