Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0442.Seq
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6DAQ8 Cluster: Exbb\tolq family transport protein; n=1...    32   6.2  
UniRef50_Q8IAV6 Cluster: Putative uncharacterized protein PF08_0...    32   6.2  

>UniRef50_A6DAQ8 Cluster: Exbb\tolq family transport protein; n=1;
           Caminibacter mediatlanticus TB-2|Rep: Exbb\tolq family
           transport protein - Caminibacter mediatlanticus TB-2
          Length = 182

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +1

Query: 1   FFFFFFLWPHC-IFSYTKKENCDLFNTEIIIIFRLHLSIRACIIKTSQCHKYIVKSC 168
           F FF F + +  +F + KKE   L +  I  +F ++ S+ +C+ K ++ +KY   +C
Sbjct: 27  FVFFVFFYKYISLFIWIKKEEEALNSLLISELFPMNSSLYSCLEKANKPNKYTFDAC 83


>UniRef50_Q8IAV6 Cluster: Putative uncharacterized protein PF08_0089;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PF08_0089 - Plasmodium falciparum (isolate 3D7)
          Length = 2651

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 1    FFFFFFLWPHCIFSYTKKENCDLFNTEIIIIFRLHLSIR 117
            F ++F L+ +CIF Y KKEN  L N  I ++   ++ I+
Sbjct: 2473 FCYYFHLY-YCIFFYNKKENAFLLNMFISLLVDSYIEIQ 2510


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,949,245
Number of Sequences: 1657284
Number of extensions: 6528150
Number of successful extensions: 11184
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11101
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)