Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0442.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    26   0.16 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    26   0.16 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.7  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 43  YTKKENCDLFNTEIIIIFRLHL 108
           Y +K N  +F T +++IF +HL
Sbjct: 120 YLEKRNRHIFRTSVLLIFVMHL 141


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 43  YTKKENCDLFNTEIIIIFRLHL 108
           Y +K N  +F T +++IF +HL
Sbjct: 120 YLEKRNRHIFRTSVLLIFVMHL 141


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 184 SSILHTLAEILHSVTYNRNPRVIFVRYR 267
           ++IL  L +  H+V  N N  ++++ Y+
Sbjct: 859 ANILDLLMDYEHTVKINENISMLYIGYQ 886


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 184 SSILHTLAEILHSVTYNRNPRVIFVRYR 267
           ++IL  L +  H+V  N N  ++++ Y+
Sbjct: 859 ANILDLLMDYEHTVKINENISMLYIGYQ 886


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,538
Number of Sequences: 336
Number of extensions: 1924
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)