Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0442.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    24   3.3  
AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    23   7.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.6  

>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 23  GHTVYLVIPKKKTAIYLIL 79
           GHT+Y  IPK+K  I  +L
Sbjct: 82  GHTLYPNIPKEKALINRVL 100


>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 7/34 (20%), Positives = 18/34 (52%)
 Frame = -2

Query: 324 CLRSQSKEINPVNKAQHFRSISYKYDSRVAIIGN 223
           C+ +  +   P N+  H++++  +Y +   + GN
Sbjct: 41  CIGTNGRMSVPANREYHYKNLRDRYTNCTYVDGN 74


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 7/34 (20%), Positives = 18/34 (52%)
 Frame = -2

Query: 324 CLRSQSKEINPVNKAQHFRSISYKYDSRVAIIGN 223
           C+ +  +   P N+  H++++  +Y +   + GN
Sbjct: 1   CIGTNGRMSVPANREYHYKNLRDRYTNCTYVDGN 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,272
Number of Sequences: 2352
Number of extensions: 7571
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)