Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0441.Seq
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0133 + 8661030-8661141,8661727-8662031,8662158-8662331,866...    32   0.61 
01_05_0369 - 21468204-21468595,21471417-21471606,21471680-214718...    30   1.9  
09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040           29   3.2  
06_02_0026 + 10729415-10729434,10730049-10730423,10730511-10732338     29   4.3  
11_03_0148 + 10762150-10762264,10762347-10762776,10764653-107647...    28   7.5  
01_05_0306 - 20662851-20663093,20663180-20663320,20666640-20667026     28   9.9  

>11_02_0133 +
           8661030-8661141,8661727-8662031,8662158-8662331,
           8662469-8662783,8662886-8663456,8663474-8663786,
           8663870-8663968,8664202-8664315,8664403-8664463,
           8664565-8664657,8664742-8664927
          Length = 780

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -3

Query: 162 PRRLCDRQNKVPSTLATSLAWGKHWIARAENPLVGTMMIFDPID 31
           P R+C  Q+ V      +LA G H+I    +P  GT+++ DP+D
Sbjct: 615 PTRICQTQHTV------TLALGDHYICLLIHPKDGTVVVLDPLD 652


>01_05_0369 -
           21468204-21468595,21471417-21471606,21471680-21471867,
           21484028-21484580
          Length = 440

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 1   ARRTRPRRPAVDWIENHHCAHKRIFSPSYPVLTPRERSGKC 123
           AR TR RRP  +     HC  +   S  +P    R R   C
Sbjct: 106 ARETRQRRPEAEQWRQRHCCQRGRVSGDFPTNRRRRRGRGC 146


>09_02_0151 - 5035572-5035954,5036309-5036324,5036420-5037040
          Length = 339

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 205 GLPRMEHRSGPPSAASTAMRPP 140
           GL R  HR+G P AA+ A +PP
Sbjct: 261 GLRRRAHRTGEPRAAAAACQPP 282


>06_02_0026 + 10729415-10729434,10730049-10730423,10730511-10732338
          Length = 740

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +2

Query: 323 HSTRRFLVICTYKQETLTVRAGINLPKSSPGDVLNSFNSHHTGDVEPFENQDMDY 487
           H+TR++L++      ++T +AG+N P    G    + N H  GD    +N+   Y
Sbjct: 584 HATRKYLMLLAVLAASVTYQAGLNPP---GGVWQGNSNGHAAGDPVMHDNRRYRY 635


>11_03_0148 +
           10762150-10762264,10762347-10762776,10764653-10764735,
           10764980-10765068,10765178-10765251,10765333-10765383,
           10765687-10765763,10766237-10767012
          Length = 564

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 20/76 (26%), Positives = 33/76 (43%)
 Frame = +2

Query: 290 VIVQENLPILTHSTRRFLVICTYKQETLTVRAGINLPKSSPGDVLNSFNSHHTGDVEPFE 469
           +I   NLPI T +TRR      +    + +        + P +V++S   H T  V  + 
Sbjct: 342 IIESSNLPIGTGTTRRLKDSSDHTDNVMDINVN-----TEPNNVVSS---HFTNGVGNYG 393

Query: 470 NQDMDYNELRPARLKP 517
           +Q   YN   P  ++P
Sbjct: 394 SQHYGYNGWSPISMQP 409


>01_05_0306 - 20662851-20663093,20663180-20663320,20666640-20667026
          Length = 256

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 426 FRTSPGLDLGKLMPARTVNVSCLYVHITRKRRVLWVRIGRFS 301
           +R  PGLD G L   R+ NVS   +     RR L+  + R++
Sbjct: 81  YRDDPGLDQGDLTVLRSANVSTQKLARVAVRRRLYPLLRRYN 122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,893,610
Number of Sequences: 37544
Number of extensions: 471181
Number of successful extensions: 1350
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)