Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0441.Seq
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122225-1|AAM52737.1|  561|Drosophila melanogaster RE22905p pro...    86   5e-17
AE014134-3234|AAF53889.2|  561|Drosophila melanogaster CG16798-P...    86   5e-17
X75541-1|CAA53229.1| 1355|Drosophila melanogaster spalt protein ...    29   7.4  
AY118990-1|AAM50850.1|  618|Drosophila melanogaster LP02703p pro...    29   7.4  
AE014296-859|AAF47909.1|  618|Drosophila melanogaster CG11349-PA...    29   7.4  
AE014134-2066|AAF53097.3| 1365|Drosophila melanogaster CG6464-PA...    29   7.4  

>AY122225-1|AAM52737.1|  561|Drosophila melanogaster RE22905p
           protein.
          Length = 561

 Score = 86.2 bits (204), Expect = 5e-17
 Identities = 56/158 (35%), Positives = 79/158 (50%)
 Frame = +2

Query: 35  IGSKIIIVPTRGFSARAIQCLPHASEVASVDGTLFWXXXXXXXXXXXXXAVLHTRQSQQR 214
           +  + I++PT+GF+A A QCLPHASE+    G  F                  +  + + 
Sbjct: 237 LAGQSIVIPTKGFTAHATQCLPHASEIEVETGPYFGGRIVVDGGNCGIKGDA-SDAADKY 295

Query: 215 TRRIHFTHPSRRVRSDVNETTVATYVIVQENLPILTHSTRRFLVICTYKQETLTVRAGIN 394
           T RI        V+ + N  TV T++ VQENL I THSTRRF+V+C+Y     TVRA   
Sbjct: 296 TMRIDHKECGSLVKPETN--TVETFITVQENLGIFTHSTRRFVVVCSYHSGMQTVRASFT 353

Query: 395 LPKSSPGDVLNSFNSHHTGDVEPFENQDMDYNELRPAR 508
           +P      V  ++  +     EP E+Q +   ELRP R
Sbjct: 354 VP--GKNGVAAAYEPN--DPFEPDEDQRLG-RELRPMR 386


>AE014134-3234|AAF53889.2|  561|Drosophila melanogaster CG16798-PA
           protein.
          Length = 561

 Score = 86.2 bits (204), Expect = 5e-17
 Identities = 56/158 (35%), Positives = 79/158 (50%)
 Frame = +2

Query: 35  IGSKIIIVPTRGFSARAIQCLPHASEVASVDGTLFWXXXXXXXXXXXXXAVLHTRQSQQR 214
           +  + I++PT+GF+A A QCLPHASE+    G  F                  +  + + 
Sbjct: 237 LAGQSIVIPTKGFTAHATQCLPHASEIEVETGPYFGGRIVVDGGNCGIKGDA-SDAADKY 295

Query: 215 TRRIHFTHPSRRVRSDVNETTVATYVIVQENLPILTHSTRRFLVICTYKQETLTVRAGIN 394
           T RI        V+ + N  TV T++ VQENL I THSTRRF+V+C+Y     TVRA   
Sbjct: 296 TMRIDHKECGSLVKPETN--TVETFITVQENLGIFTHSTRRFVVVCSYHSGMQTVRASFT 353

Query: 395 LPKSSPGDVLNSFNSHHTGDVEPFENQDMDYNELRPAR 508
           +P      V  ++  +     EP E+Q +   ELRP R
Sbjct: 354 VP--GKNGVAAAYEPN--DPFEPDEDQRLG-RELRPMR 386


>X75541-1|CAA53229.1| 1355|Drosophila melanogaster spalt protein
           protein.
          Length = 1355

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -3

Query: 237 CVKCMRLVRCWDCLV--WSTALGRRPLPRRLCDRQNKVPSTLATSLA 103
           CV C R++ C   L   + T  G RP   R+C R       L T +A
Sbjct: 826 CVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMA 872


>AY118990-1|AAM50850.1|  618|Drosophila melanogaster LP02703p
           protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +2

Query: 191 HTRQSQQRTRRIHFTHPSRRVRSDVNE---TTVATYVIVQENLP 313
           + ++ + +T+ IH+ H    VR+D N+   T  AT V+ +   P
Sbjct: 92  YDKKPEVKTQHIHYKHSKPHVRTDYNQDLFTPAATQVVYRRRRP 135


>AE014296-859|AAF47909.1|  618|Drosophila melanogaster CG11349-PA
           protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +2

Query: 191 HTRQSQQRTRRIHFTHPSRRVRSDVNE---TTVATYVIVQENLP 313
           + ++ + +T+ IH+ H    VR+D N+   T  AT V+ +   P
Sbjct: 92  YDKKPEVKTQHIHYKHSKPHVRTDYNQDLFTPAATQVVYRRRRP 135


>AE014134-2066|AAF53097.3| 1365|Drosophila melanogaster CG6464-PA
           protein.
          Length = 1365

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = -3

Query: 237 CVKCMRLVRCWDCLV--WSTALGRRPLPRRLCDRQNKVPSTLATSLA 103
           CV C R++ C   L   + T  G RP   R+C R       L T +A
Sbjct: 826 CVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMA 872


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,031,498
Number of Sequences: 53049
Number of extensions: 771543
Number of successful extensions: 2025
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2019
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)