Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0441.Seq
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53180-7|AAA96289.1|  425|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z99278-7|CAB16488.1|  382|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti...    28   6.7  
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti...    28   6.7  
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti...    28   6.7  
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.    28   6.7  
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo...    28   6.7  
AL117207-3|CAB60391.1|  331|Caenorhabditis elegans Hypothetical ...    28   8.9  
AF025471-1|AAB71058.1|  379|Caenorhabditis elegans Hypothetical ...    28   8.9  

>U53180-7|AAA96289.1|  425|Caenorhabditis elegans Hypothetical
           protein D1014.2 protein.
          Length = 425

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/53 (20%), Positives = 26/53 (49%)
 Frame = +2

Query: 224 IHFTHPSRRVRSDVNETTVATYVIVQENLPILTHSTRRFLVICTYKQETLTVR 382
           +HF HP  R  +      V  ++I    +P+   ++   L++C  ++ ++ +R
Sbjct: 206 VHFIHPKTRAANKYARYVVYIHMIFVVIIPMFLSTSLNILLVCALRKNSMPLR 258


>Z99278-7|CAB16488.1|  382|Caenorhabditis elegans Hypothetical
           protein Y53C12B.6 protein.
          Length = 382

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +2

Query: 239 PSRRVRSDV--NETTVATYVIVQENLPILTHSTRRFLVICTYKQETLTVRAGINLPKSSP 412
           PSRR R  V     T+++ ++V  +  I+TH    + + C Y++E   V   +++    P
Sbjct: 81  PSRRKRQIVAPRGMTMSSVLVVSYHGSIITHRDVAYQIDCFYREENSRVETMLSVNAPQP 140


>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
           protein protein1, isoform d protein.
          Length = 1058

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 571 LVVAAFGGIALLIWKVVPQSAKDNAFCIDNILFISYQ 681
           +VVA  G +  L  +V+ QS  DN FCI +    SY+
Sbjct: 728 IVVAPSGTVVRLKGQVISQSFMDNTFCIISPASESYK 764


>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
           protein protein1, isoform c protein.
          Length = 1211

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 571 LVVAAFGGIALLIWKVVPQSAKDNAFCIDNILFISYQ 681
           +VVA  G +  L  +V+ QS  DN FCI +    SY+
Sbjct: 881 IVVAPSGTVVRLKGQVISQSFMDNTFCIISPASESYK 917


>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
           protein protein1, isoform a protein.
          Length = 1124

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 571 LVVAAFGGIALLIWKVVPQSAKDNAFCIDNILFISYQ 681
           +VVA  G +  L  +V+ QS  DN FCI +    SY+
Sbjct: 794 IVVAPSGTVVRLKGQVISQSFMDNTFCIISPASESYK 830


>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
          Length = 1058

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 571 LVVAAFGGIALLIWKVVPQSAKDNAFCIDNILFISYQ 681
           +VVA  G +  L  +V+ QS  DN FCI +    SY+
Sbjct: 728 IVVAPSGTVVRLKGQVISQSFMDNTFCIISPASESYK 764


>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
           A protein.
          Length = 1124

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 571 LVVAAFGGIALLIWKVVPQSAKDNAFCIDNILFISYQ 681
           +VVA  G +  L  +V+ QS  DN FCI +    SY+
Sbjct: 794 IVVAPSGTVVRLKGQVISQSFMDNTFCIISPASESYK 830


>AL117207-3|CAB60391.1|  331|Caenorhabditis elegans Hypothetical
           protein Y60A3A.3 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 544 YSEITLVMFLVVAAFGGIALLIWKVVPQSAKDN 642
           Y + TL +F + +  G  + LIWK V +S +DN
Sbjct: 299 YRQATLEIFHLSSKRGANSQLIWKTVNRSQQDN 331


>AF025471-1|AAB71058.1|  379|Caenorhabditis elegans Hypothetical
           protein R52.3 protein.
          Length = 379

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 353 TYKQETLTVRAGINLPKSSPGDVLNSFNSHHT-GDVEPFENQDMDYNE 493
           T+K +       ++LP SS  D  NSF   HT  ++  F  +D DY++
Sbjct: 65  TFKTKFTMKLVAVDLP-SSQSDFNNSFLLKHTFNNISKFVERDSDYSD 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,244,461
Number of Sequences: 27780
Number of extensions: 386693
Number of successful extensions: 1123
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)