Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0440.Seq
         (745 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903     30   1.7  
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631...    29   2.9  
09_06_0015 - 20234231-20234344,20234846-20234902,20234968-202351...    29   2.9  
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836...    29   3.9  
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352...    29   5.2  
03_01_0336 - 2659349-2659486,2659607-2659758,2660257-2660365,266...    28   9.0  

>11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903
          Length = 1135

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +2

Query: 305 FDNPKVVEKFDMVLKAWMGAGASGVRLNNARHLLVELLEE 424
           +D+P+V EKF   L+AW+ AGAS    +  R +L  ++++
Sbjct: 210 YDSPRVKEKFH--LRAWVPAGASPETSSGMRGILRAVIQK 247


>12_02_0522 -
           19960092-19960595,19962737-19962880,19963042-19963131,
           19963215-19963320,19963400-19963574,19963849-19963951,
           19964382-19964636,19964726-19964803,19964908-19965000,
           19965091-19965222,19965898-19966002,19966127-19966201,
           19966284-19966340,19966419-19966532,19966613-19966756,
           19966886-19966969,19967071-19967164,19967244-19967369,
           19967507-19967580,19967672-19967875,19968234-19968388,
           19968860-19968947,19969505-19969730,19970235-19970286,
           19970766-19970958,19973221-19973314,19973744-19973788,
           19974874-19974896
          Length = 1210

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 156 STEPYTDYFIWTKEQPANWVSKINMPAF 239
           S EP  D+FIWT E    W+ +IN+ ++
Sbjct: 42  SPEPL-DFFIWTVEDVGLWLEEINLGSY 68


>09_06_0015 -
           20234231-20234344,20234846-20234902,20234968-20235111,
           20235581-20235745,20235817-20236005,20236086-20236326,
           20236412-20236512,20236704-20237241,20238101-20238132,
           20238677-20238760
          Length = 554

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 484 PEVVPHVIRVHATAATDARLLLKQFDEQVTRVIQSD 377
           P + PHV    + A T+ RLL +Q D++    +Q+D
Sbjct: 371 PSLYPHVEHAPSPALTEQRLLREQQDDEYLASLQAD 406


>08_02_1329 -
           26182762-26183007,26183149-26183249,26183533-26183602,
           26183692-26183895,26186435-26186941,26188672-26188677
          Length = 377

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -1

Query: 478 VVPHVIRVHATAATDARLLLKQFD--EQVTRVIQSDSTSAGTHPGLQDHVELLNNFRIIE 305
           V+P++IR+ +TA+T AR   +  D   Q   VI  ++T+   + G Q    +L   R   
Sbjct: 172 VIPNIIRIMSTAST-ARSRKRAHDGSRQKVDVINLETTAPVVNTGSQHEALILRGTRTSP 230

Query: 304 IKISAV 287
           I + A+
Sbjct: 231 IDVEAL 236


>03_01_0458 -
           3521938-3522024,3522133-3522213,3522673-3522806,
           3523189-3523270,3523420-3523692,3523953-3524162,
           3524252-3524337,3525197-3525289,3526003-3526227,
           3526320-3526930,3529328-3529395,3529491-3529679,
           3529773-3529901,3530013-3532484
          Length = 1579

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 407 VELLEEKTRVGRGSSVDADHMRYDFWEHKHTTDLRSSRSS 526
           +++LEE+     GS  D D M  D W  K  +D   S +S
Sbjct: 443 LKILEEELADNVGSDRDKDSMSSDIWSTKDKSDTSDSSTS 482


>03_01_0336 -
           2659349-2659486,2659607-2659758,2660257-2660365,
           2660459-2660563,2660874-2660957,2661072-2662745
          Length = 753

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 355 PGLQDHVELLNNFRIIEIKISAV 287
           PG+ DH+E  N   I+ +KI A+
Sbjct: 538 PGITDHIEYWNGEEIMNLKIEAI 560


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,211,724
Number of Sequences: 37544
Number of extensions: 309631
Number of successful extensions: 804
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)