Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0440.Seq
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    56   3e-10
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    48   7e-08
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    48   7e-08
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    46   4e-07
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.57 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.75 
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    25   0.99 
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    24   1.7  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   3.0  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   3.0  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 56.4 bits (130), Expect = 3e-10
 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
 Frame = +3

Query: 36  TLDEFKILFNKIKKIGIRVIXDLIPNYVFTNHTWFVQSENSTEPYTDYFIW--------T 191
           TL +F  L  + K +G++VI D +PN+    H WF +S    +PY +Y++W        T
Sbjct: 98  TLADFDRLVRRAKSLGLKVILDFVPNHSSHEHPWFKKSVQRIKPYDEYYVWRDARIVNGT 157

Query: 192 KEQPANWVS 218
           ++ P NW+S
Sbjct: 158 RQPPNNWLS 166



 Score = 43.6 bits (98), Expect = 2e-06
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
 Frame = +2

Query: 251 ESQMFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMGAGASGVRLNNARHLL--VELLEE 424
           E + +YLHQF     DLN+ +  + ++   VL  WM  G  G R++   H+     LL+E
Sbjct: 178 ERKQYYLHQFATGQPDLNYRSAALDQEMKNVLTFWMNRGVDGFRIDAINHMFEDARLLDE 237

Query: 425 KTRVGRGSSVDADHMRYDFWEHKHTTD 505
            +     +  D     Y+   H +T D
Sbjct: 238 PS----ANRTDLSKDDYESLVHLYTRD 260


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 48.4 bits (110), Expect = 7e-08
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
 Frame = +3

Query: 36  TLDEFKILFNKIKKIGIRVIXDLIPNYVFTNHTWFVQSENSTEPYTDYFIW--------T 191
           T+ +   L +   + G+++I D +PN+    H WF  S  + EPY +Y+IW         
Sbjct: 98  TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGK 157

Query: 192 KEQPANWVSKINMPAFTRSEK 254
           +  P NWV      A++  E+
Sbjct: 158 RVPPTNWVGVFGGSAWSWREE 178



 Score = 45.6 bits (103), Expect = 5e-07
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +2

Query: 245 KRESQMFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMGAGASGVRLN 388
           + E Q +YLHQF     DLN+ NP V++    VL+ W+  G  G R++
Sbjct: 176 REERQAYYLHQFAPEQPDLNYYNPVVLDDMQNVLRFWLRRGFDGFRVD 223


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 48.4 bits (110), Expect = 7e-08
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
 Frame = +3

Query: 36  TLDEFKILFNKIKKIGIRVIXDLIPNYVFTNHTWFVQSENSTEPYTDYFIW--------T 191
           T+ +   L +   + G+++I D +PN+    H WF  S  + EPY +Y+IW         
Sbjct: 98  TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGK 157

Query: 192 KEQPANWVSKINMPAFTRSEK 254
           +  P NWV      A++  E+
Sbjct: 158 RVPPTNWVGVFGGSAWSWREE 178



 Score = 45.6 bits (103), Expect = 5e-07
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +2

Query: 245 KRESQMFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMGAGASGVRLN 388
           + E Q +YLHQF     DLN+ NP V++    VL+ W+  G  G R++
Sbjct: 176 REERQAYYLHQFAPEQPDLNYYNPVVLDDMQNVLRFWLRRGFDGFRVD 223


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 46.0 bits (104), Expect = 4e-07
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
 Frame = +3

Query: 36  TLDEFKILFNKIKKIGIRVIXDLIPNYVFTNHTWFVQS-----ENSTEPYTDYFIW 188
           T+ + + L  + KK  ++VI DL+PN+    H WF  S      N+T  Y DY+IW
Sbjct: 96  TIKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIW 151



 Score = 42.7 bits (96), Expect = 3e-06
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +2

Query: 257 QMFYLHQFCDNCADLNFDNPKVVEKFDMVLKAWMGAGASGVRLNNARHL 403
           + FY HQF     DLN+ N  V E+   ++K W+  G  G R++   HL
Sbjct: 187 KQFYFHQFYKQQPDLNYRNSDVREEMKNIMKFWLDKGIDGFRIDAVPHL 235


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 205 LIGFQKSTCQRLHEARKSDVLPAS 276
           ++ ++ S C+  HE R +DV+P +
Sbjct: 514 ILVYEPSACRPRHEIRSTDVIPGT 537


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 12   FGTRHKRDTLDEFKILFNKIKKIGIRVIXDLIP 110
            F   HK+    E+  + N +K  G  V+ DL+P
Sbjct: 1494 FVVEHKKKNQQEWNQVSNNVKPGGNFVVLDLVP 1526


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 649 KKSPCPSRKTQTRSLWDKQ 705
           +K  C  RKT  + LWDK+
Sbjct: 75  EKGVCICRKTSFKDLWDKR 93


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 649 KKSPCPSRKTQTRSLWDKQ 705
           +K  C  RKT  + LWDK+
Sbjct: 75  EKVGCICRKTSFKDLWDKR 93


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 180 FIWTKEQPANWVSKINMPAFT 242
           F+W +  P   V  +++P FT
Sbjct: 190 FLWKEGDPVQVVKNLHLPRFT 210


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 180 FIWTKEQPANWVSKINMPAFT 242
           F+W +  P   V  +++P FT
Sbjct: 190 FLWKEGDPVQVVKNLHLPRFT 210


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,416
Number of Sequences: 438
Number of extensions: 3374
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)