Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0437.Seq
(827 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 34 0.028
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 27 2.5
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 27 2.5
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 27 4.3
SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces pom... 26 5.7
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 5.7
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 5.7
SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating ... 26 5.7
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 26 5.7
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 7.5
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 25 9.9
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 25 9.9
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 33.9 bits (74), Expect = 0.028
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 299 VYIPDRRRQTLADTSYVPQQENEV--YYPQQPENPIFSPTQAIELADP 436
VY+PD Y+P+ V YYPQQP P+F ++ EL DP
Sbjct: 497 VYVPDAT-DAAKPQYYIPKDPYPVPHYYPQQPL-PLFDSSEMTELVDP 542
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 27.5 bits (58), Expect = 2.5
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 121 TIPTMETW-TPFPTARAIVTEEAWS*AVTTILTTTPEL*AVVWPRSVPPARSRTGAFNGP 297
T P +ET TP A TE V+TI TTTP + A++ P +V T A P
Sbjct: 215 TTPMVETMITPMVEAMTTPTEVVGRSMVSTIRTTTP-MEAMITP-TVETTTLPTAAMTTP 272
Query: 298 GVHT*SSP 321
T ++P
Sbjct: 273 VEETTTTP 280
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 356 QENEVYYPQQPENPIFSPTQAIELADPTE 442
+ N YPQ + P+ P AI DP +
Sbjct: 155 EHNGPVYPQDQQGPVIIPNSAISSTDPDD 183
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 109 KRIPTIPTMETWTPFPTARAIVTE 180
K IPT PT E+ PFP+ A T+
Sbjct: 286 KSIPTTPTGESLWPFPSENANKTQ 309
>SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/50 (22%), Positives = 25/50 (50%)
Frame = +3
Query: 150 LSYGSGDSNRGGLVMSRYYNPYYNPRAVGGGMAAFCTASPKPHRRLQRAR 299
+++GSG++N G L +++ Y P + G + P + L++ +
Sbjct: 519 VTFGSGNTNIGSLRQTKFKQSNYTPPELNDGSRQHRPSRPSKNPSLKKKK 568
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 264 SPKPHRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSS 404
S H + + +++ +P+P YR + TLSN++T S
Sbjct: 45 SQDTHSCASKQDAVFQLLSETKIPVPNRYRKISHRLSTLSNKKTLKS 91
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +2
Query: 338 TSYVPQQENEVYYPQQPENPIFSPTQAIELADPTEKIELYSTT 466
TS+ PQ ++ +Y + + S T+ ++ + T K++ S T
Sbjct: 720 TSFNPQHDSRIYNHNGKQKLVISFTETMDCNEITSKLQFSSKT 762
>SPBC19F8.07 |crk1|mop1, mcs6|cyclin-dependent kinase activating
kinase Crk1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 126 PYYGNVDSLSYGSGDSNRGGLVMSRYYNPYYNPRAVGGGMAAFCTASPKP 275
P G +++L +G L M YNPY P A + +A PKP
Sbjct: 249 PPNGGMEALFSAAGHEEIDLLKMMLDYNPYRRPTAQQALEHHYFSALPKP 298
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 650 RSSNVLRMGGRRSGPEPTAVARYSTVEEASHSTHA 754
+ ++V+R+G R PE AV + + HS A
Sbjct: 441 QGASVMRLGSRTKDPEIAAVTIFQKAKHTKHSFKA 475
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 130 TMETWTPFPTARAIVTEEAWS*AVTTILTTTPEL*AVVWPRSVP 261
T+ TP+PT T + +VTT LT P V+ VP
Sbjct: 269 TVYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEVP 312
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 130 TMETWTPFPTARAIVTEEAWS*AVTTILTTTPEL*AVVWPRSVP 261
T+ TP+PT T + +VTT LT P V+ VP
Sbjct: 347 TVYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEVP 390
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 130 TMETWTPFPTARAIVTEEAWS*AVTTILTTTPEL*AVVWPRSVP 261
T+ TP+PT T + +VTT LT P V+ VP
Sbjct: 503 TVYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEVP 546
Score = 25.8 bits (54), Expect = 7.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 130 TMETWTPFPTARAIVTEEAWS*AVTTILTTTPEL*AVVWPRSVP 261
T+ TP+PT T + +VTT LT P V+ VP
Sbjct: 581 TVYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEVP 624
Score = 25.4 bits (53), Expect = 9.9
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 130 TMETWTPFPTARAIVTEEAWS*AVTTILTTTPEL*AVVWPRSVP 261
T+ TP+PT T + +VTT LT P V+ +P
Sbjct: 425 TVYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEIP 468
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 25.4 bits (53), Expect = 9.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 634 WVVRSHLLPRLPQEASSPVSSY*RQPSSXWAPQLRVLPALV 512
W V H+ PRLP+ ++ Y PSS W+ L + A++
Sbjct: 516 WNVEEHINPRLPE---GSINDY---PSSFWSDFLHLNRAML 550
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 25.4 bits (53), Expect = 9.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 326 TLADTSYVPQQENEVYYPQQPENPIFSPTQAIELADPTEKIELYSTTLV 472
T+ +++ PQQ + P QP+N + P ++ D K EL S +LV
Sbjct: 235 TVIESTIAPQQAT-THPPSQPKNAVSVPIPKMDSTD--SKGELPSESLV 280
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,109,482
Number of Sequences: 5004
Number of extensions: 61421
Number of successful extensions: 195
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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