Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0437.Seq
(827 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 31 0.85
12_01_0750 - 6754126-6755248,6755331-6755791 31 1.5
12_02_0640 - 21447470-21448309 30 2.0
12_02_0635 - 21430245-21431156 30 2.0
09_06_0264 - 21929086-21931368 30 2.0
02_04_0102 + 19743276-19743420,19743500-19743966 30 2.0
01_06_0453 + 29501600-29502403 30 2.0
06_01_0760 - 5676973-5677830 25 2.5
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784... 30 2.6
06_01_1013 - 7931756-7935109 29 3.4
02_05_0894 - 32585640-32585672,32585939-32585967,32586937-32588443 29 3.4
09_02_0626 + 11352690-11353078,11353106-11354006 29 4.5
09_02_0495 + 9880714-9881196 29 4.5
08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213... 29 4.5
03_06_0332 + 33189255-33189314,33189450-33189485,33189580-331896... 29 4.5
01_06_1341 - 36434098-36436080 29 4.5
11_06_0679 - 26227654-26227770,26234067-26236217 29 6.0
10_05_0074 - 8865884-8866567,8866612-8866923 29 6.0
06_03_1382 - 29758759-29758806,29758888-29758943,29759901-297600... 29 6.0
06_03_1181 - 28227746-28229115,28229130-28229307 29 6.0
06_03_0854 + 25400855-25403741,25406174-25407708 29 6.0
01_03_0082 - 12280109-12281068 29 6.0
12_02_0643 - 21461123-21461902 28 7.9
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 28 7.9
04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004 28 7.9
01_03_0059 + 12109301-12109330,12109465-12109587,12109663-12110112 28 7.9
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +2
Query: 251 VLYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQAIELA 430
+L R E A P T Y P +Y PQ + E Y P QP+ + P ++
Sbjct: 210 LLARDVEHAAYPPTSTTYPPQPYPPQPQGQTYPPQPQGETYQP-QPQRETYPPQPQVQPY 268
Query: 431 DPTEKIELY 457
P + + Y
Sbjct: 269 PPKPQGQPY 277
>12_01_0750 - 6754126-6755248,6755331-6755791
Length = 527
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -1
Query: 428 PVRSLEWG*RSGSLVAEGNRLRFLVAVR-SW-YRQGSGGDDQVCTPGPLKAP 279
P L W S A G R F+VA R +W +R+G GD C G L P
Sbjct: 212 PREFLRWLTSQPSWAALGGRDHFMVAARTTWMFRRGGAGDSLGCGNGFLSRP 263
>12_02_0640 - 21447470-21448309
Length = 279
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 263 GGTERGHTTAYSSGVVVRIVVTAHDQASSVTIA 165
GG E GH+ + + +V+RIV AS++T A
Sbjct: 10 GGKEEGHSASEAVSIVLRIVTVGLSLASAITTA 42
>12_02_0635 - 21430245-21431156
Length = 303
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 263 GGTERGHTTAYSSGVVVRIVVTAHDQASSVTIA 165
GG E GH+ + + +V+RIV AS++T A
Sbjct: 10 GGKEEGHSASEAVSIVLRIVTVGLSLASAITTA 42
>09_06_0264 - 21929086-21931368
Length = 760
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 323 QTLADTSYVPQQENEVYYPQQPENPIFSPTQAIELADPTEKI 448
+TLAD +P+ E E +P++ +SP+Q I +PT +
Sbjct: 699 KTLADKLQMPEPEPEPEREPEPKSGPYSPSQEIVQGEPTATV 740
>02_04_0102 + 19743276-19743420,19743500-19743966
Length = 203
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 323 GGDDQVCTPGPLKAPVRLRAGGTERGHTTAYSSGVVV 213
GG +Q+C PG L + AGG E+ + A +S + V
Sbjct: 104 GGAEQLCAPGGLAVAPVVAAGGREKHGSYALASSLAV 140
>01_06_0453 + 29501600-29502403
Length = 267
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/82 (28%), Positives = 33/82 (40%)
Frame = +3
Query: 204 YNPYYNPRAVGGGMAAFCTASPKPHRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLS 383
+ P YN A G A C S K + R+R AARP P P R K +
Sbjct: 106 FPPEYNLSAAGAN--AICDESEKQQAQYTRSRSE---PAARPAPPPVEKRGKAENAAAAG 160
Query: 384 NQRTRSSAPLKRSNWLTPLKRS 449
R + + S+ + L+R+
Sbjct: 161 AARAKVAVKKSSSSEVRKLERA 182
>06_01_0760 - 5676973-5677830
Length = 285
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 159 GSGDSNRGGLVMSRYYNPYYNPRAVGGGMA 248
GSG + G + Y PYY P G A
Sbjct: 171 GSGSGSGSGYGQAGGYGPYYGPYGGSGAYA 200
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 108 QAYPYNPYYGNVDSLSYGSGDSNRGG 185
QA Y PY GN + G G GG
Sbjct: 140 QAGGYGPYGGNAYAQGGGQGGGGGGG 165
>03_06_0074 -
31476094-31476215,31477803-31478238,31478438-31478485,
31478569-31479018,31479567-31479681,31480052-31480905
Length = 674
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 259 PPARSRTGAFNGPGVHT*SSPPDPCRYQLRTATRKRSLLPSATREPDLQPHS 414
PP R PG+ T P TAT KR+ P++T P PH+
Sbjct: 43 PPLPPRRSPQKRPGLPTIPENGPPAGMATATATPKRTRTPTSTCAPPPPPHA 94
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 718 VACNCGRLRTTAPTSHPKNIGRTRMWALWVVRSHLLPRLPQEA 590
+AC+CGR+ T P S M+ + +++ +P P E+
Sbjct: 719 IACSCGRITATVPCSAGGTANGDNMFEVSIIQKLPMPLQPVES 761
>02_05_0894 - 32585640-32585672,32585939-32585967,32586937-32588443
Length = 522
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +3
Query: 57 IMKVMYAFVMMSCA-LLVQAYPYNPYYGNVD--SLSYGSGDSNRGGL 188
+MK M F+ + + L+V AYP+ Y GN D SL Y N G L
Sbjct: 209 VMKPMLDFLAQTGSYLMVNAYPFFAYSGNADVISLDYALFRPNAGVL 255
>09_02_0626 + 11352690-11353078,11353106-11354006
Length = 429
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -1
Query: 461 WSTIRSFQWGQPVRSLEWG*RSGSLVA---EGNRLRFLVAVRSWYRQGSGGDD 312
W T+ F G R+ E + + + EG+ RF+ + S GSGGDD
Sbjct: 373 WRTLEDFPPGTEARAREQVREAANAIVSGFEGSAPRFISGLASDEESGSGGDD 425
>09_02_0495 + 9880714-9881196
Length = 160
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 105 VQAYPYNPYYGNVDSLSYGSGDSNRGGLVMSRYYNP 212
V +YP P G+ S S G GD GGL Y P
Sbjct: 47 VNSYPPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPP 82
>08_02_1442 + 27120604-27120890,27121029-27121166,27121280-27121382,
27121877-27122036,27122927-27123114,27123203-27124770,
27124882-27125869,27126595-27127098,27127347-27127433,
27127753-27127821,27128012-27128041
Length = 1373
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -2
Query: 535 LRVLPALVVRSGRRFGSLGNRYQSGGVQFDLFSGVSQFDRLSGAEDRVLWLLRVIDFVFL 356
+R LPAL R L R+Q GG F L V R AE+ W+ V + +
Sbjct: 1271 VRRLPALKSLMIRDCPFLVRRFQEGGEYFGLAPHVKLSQRQKAAEEAAGWMAPVFERLTG 1330
Query: 355 LRYVA 341
+R +A
Sbjct: 1331 IRALA 1335
>03_06_0332 +
33189255-33189314,33189450-33189485,33189580-33189648,
33190526-33190594,33190695-33190757,33190846-33190944,
33191020-33191087,33191168-33191480
Length = 258
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 219 NPRAVGGGMAAFCTASPKPHRR 284
N RA+G G+ +F T++P+ +RR
Sbjct: 97 NARAIGAGICSFSTSAPRGYRR 118
>01_06_1341 - 36434098-36436080
Length = 660
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 261 ASPKPHRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLK 416
A P+ R+ R+RC + + P P PA N +++ S + R++A L+
Sbjct: 21 AGPRARPRVSRSRCVASLASQPPTPPPAN-ANHLVQTLCASGRLARAAALLQ 71
>11_06_0679 - 26227654-26227770,26234067-26236217
Length = 755
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 9/47 (19%)
Frame = +2
Query: 323 QTLADTSYVPQQENEVYY----PQQ-----PENPIFSPTQAIELADP 436
+ + + Y+PQ N + Y P Q P P F PT+AI+ +P
Sbjct: 275 EMMFEQGYIPQMANHIQYAGQIPNQAFQFQPTQPYFQPTRAIDTKNP 321
>10_05_0074 - 8865884-8866567,8866612-8866923
Length = 331
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 703 GRLRTTAPTSHPKN-IGRTRMWALWVVRSHLLPRLPQEASSPVS 575
G TTAP P N RTR W + ++ + P ASSP++
Sbjct: 92 GMASTTAPLPKPPNKADRTRSWEIQPIQHSITPLGLAMASSPLA 135
>06_03_1382 -
29758759-29758806,29758888-29758943,29759901-29760000,
29760107-29760220,29760807-29760854,29760959-29761021,
29761237-29761439,29761518-29761578,29761685-29761790,
29761920-29761987,29762344-29762418,29762507-29762589,
29762788-29762953
Length = 396
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -1
Query: 353 AVRSWYRQGSGGDDQVCTPGPLKAPVRLRAGGTERGHTT 237
A RS G GG V P P PVR R GT G T
Sbjct: 3 AHRSPAMVGGGGAGAVGPPSPATVPVRRRCEGTAMGAIT 41
>06_03_1181 - 28227746-28229115,28229130-28229307
Length = 515
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 9/47 (19%)
Frame = +2
Query: 323 QTLADTSYVPQQENEVYY----PQQ-----PENPIFSPTQAIELADP 436
+ + + Y+PQ N + Y P Q P P F PT+AI+ +P
Sbjct: 250 EMMFEQGYIPQMANHIQYAGQIPNQAFQFQPTQPYFQPTRAIDTKNP 296
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 28.7 bits (61), Expect = 6.0
Identities = 27/81 (33%), Positives = 36/81 (44%)
Frame = +1
Query: 112 RIPTIPTMETWTPFPTARAIVTEEAWS*AVTTILTTTPEL*AVVWPRSVPPARSRTGAFN 291
RIPT T+ T P P+A TE A A + L T P + V VP + +GA
Sbjct: 1362 RIPTAVTVGT--PSPSAPTPATEPALVPASASALATAPLMQPNVVISPVPSTLAASGAA- 1418
Query: 292 GPGVHT*SSPPDPCRYQLRTA 354
+ PP P + +L TA
Sbjct: 1419 -------APPPVPAKLELATA 1432
>01_03_0082 - 12280109-12281068
Length = 319
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 327 VWRRRSGMYTWPVEGACAASGWRYRTR 247
V R S + WP+EG+ GW RTR
Sbjct: 229 VVREESIIAAWPMEGSSLGDGWLGRTR 255
>12_02_0643 - 21461123-21461902
Length = 259
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 263 GGTERGHTTAYSSGVVVRIVVTAHDQASSVTIA 165
G E GH+ + ++ +V RIV AS++T A
Sbjct: 6 GSEEEGHSASEAASIVFRIVTVGLSLASAITTA 38
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +1
Query: 139 TWTPFPTARAIVTEEAWS*AVTTILTTTPEL*AVVWPRSVPPARS 273
T TP P ARA TT T+P A P S PPA S
Sbjct: 56 TPTPIPPARAATPSSQADDVPTTTTATSPPSSAPSSPPSSPPAES 100
>04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004
Length = 578
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = +1
Query: 349 TATRKRSLLPSATREPDLQ--PH 411
T +++ SLLPS REPDL+ PH
Sbjct: 123 TLSKQNSLLPSRIREPDLELPPH 145
>01_03_0059 + 12109301-12109330,12109465-12109587,12109663-12110112
Length = 200
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 344 SWYRQGSGGDDQVCTPGPLKAPVRLRAGG 258
SWY GSG V P APV + AGG
Sbjct: 132 SWYASGSGVGRMVQVPAIDAAPVCIAAGG 160
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,343,376
Number of Sequences: 37544
Number of extensions: 519181
Number of successful extensions: 1840
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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