Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0437.Seq
         (827 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  31   5.1  
AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    30   8.9  

>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 23/68 (33%), Positives = 29/68 (42%)
 Frame = +1

Query: 118  PTIPTMETWTPFPTARAIVTEEAWS*AVTTILTTTPEL*AVVWPRSVPPARSRTGAFNGP 297
            PT PT  T T  PT   I T    +   T   T TP    +    +V P  + TG   GP
Sbjct: 4140 PT-PT-PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTGP 4197

Query: 298  GVHT*SSP 321
              HT ++P
Sbjct: 4198 PTHTSTAP 4205


>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
 Frame = +1

Query: 115 IPTIPTMETWTPFPTARAIVTEEAWS*AVTTILTTTPEL*AVVWPRSVPPARSRTGAFNG 294
           +PT+ T+ T T  PT   + T    +       TT P    V    SVP   S     + 
Sbjct: 138 VPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVPTTTSIPTTTSV 197

Query: 295 PGVHT*SS--PPDPCRYQLR--TATRKRSLLPSATREPDLQ 405
           P   T S+  PP P   Q     AT   S  P+ T    LQ
Sbjct: 198 PVTTTVSTFVPPMPLPRQNHEPVATSPSSPQPAETHPTTLQ 238


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,174,137
Number of Sequences: 237096
Number of extensions: 2501607
Number of successful extensions: 10515
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10509
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)