Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0436.Seq
         (796 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U47292-1|AAB05397.1|  129|Homo sapiens spasmolytic peptide protein.    35   0.29 
BC032820-1|AAH32820.1|  129|Homo sapiens trefoil factor 2 (spasm...    35   0.29 
AB038162-2|BAB13730.1|  129|Homo sapiens trefoil factor 2 protein.     35   0.29 
X51698-1|CAA35995.1|  130|Homo sapiens spasmolytic polypeptide p...    35   0.39 
AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.       30   8.4  

>U47292-1|AAB05397.1|  129|Homo sapiens spasmolytic peptide protein.
          Length = 129

 Score = 35.1 bits (77), Expect = 0.29
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
 Frame = -3

Query: 446 SPENGSVCSFP------LFDLRFCF*SKVRQQSLCMLVPYQIPL*QWSRC------RNNC 303
           SP N + C FP       FD   CF S V     C    + +P  +  +C      R NC
Sbjct: 35  SPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCF---HPLPKQESDQCVMEVSDRRNC 91

Query: 302 LSP*FAPDQCSSSKISFQG-VFDIP--HFPR 219
             P  +P++C+S K  F   +F++P   FP+
Sbjct: 92  GYPGISPEECASRKCCFSNFIFEVPWCFFPK 122


>BC032820-1|AAH32820.1|  129|Homo sapiens trefoil factor 2
           (spasmolytic protein 1) protein.
          Length = 129

 Score = 35.1 bits (77), Expect = 0.29
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
 Frame = -3

Query: 446 SPENGSVCSFP------LFDLRFCF*SKVRQQSLCMLVPYQIPL*QWSRC------RNNC 303
           SP N + C FP       FD   CF S V     C    + +P  +  +C      R NC
Sbjct: 35  SPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCF---HPLPKQESDQCVMEVSDRRNC 91

Query: 302 LSP*FAPDQCSSSKISFQG-VFDIP--HFPR 219
             P  +P++C+S K  F   +F++P   FP+
Sbjct: 92  GYPGISPEECASRKCCFSNFIFEVPWCFFPK 122


>AB038162-2|BAB13730.1|  129|Homo sapiens trefoil factor 2 protein.
          Length = 129

 Score = 35.1 bits (77), Expect = 0.29
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
 Frame = -3

Query: 446 SPENGSVCSFP------LFDLRFCF*SKVRQQSLCMLVPYQIPL*QWSRC------RNNC 303
           SP N + C FP       FD   CF S V     C    + +P  +  +C      R NC
Sbjct: 35  SPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCF---HPLPKQESDQCVMEVSDRRNC 91

Query: 302 LSP*FAPDQCSSSKISFQG-VFDIP--HFPR 219
             P  +P++C+S K  F   +F++P   FP+
Sbjct: 92  GYPGISPEECASRKCCFSNFIFEVPWCFFPK 122


>X51698-1|CAA35995.1|  130|Homo sapiens spasmolytic polypeptide
           protein.
          Length = 130

 Score = 34.7 bits (76), Expect = 0.39
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
 Frame = -3

Query: 446 SPENGSVCSFP------LFDLRFCF*SKVRQQSLCMLVPYQIPL*QWSRC------RNNC 303
           SP N + C FP       FD   CF S V     C    + +P  +  +C      R NC
Sbjct: 36  SPHNRTNCGFPGITSDQCFDNGCCFDSSVTGVPWCF---HPLPKQESDQCVMEVSDRRNC 92

Query: 302 LSP*FAPDQCSSSKISFQG-VFDIP 231
             P  +P++C+S K  F   +F++P
Sbjct: 93  GYPGISPEECASRKCCFSNFIFEVP 117


>AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.
          Length = 807

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -3

Query: 443 PENGSVCSFPLFDLRFCF*SKVRQQSLCMLVPYQIPL*QWSRCRNNC 303
           PE+GSVC+ P  ++  C  ++    S C++  +     +W  C   C
Sbjct: 532 PEDGSVCTLPTEEMEKCTVNEECSPSSCLMTEWG----EWDECSATC 574


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,185,926
Number of Sequences: 237096
Number of extensions: 1599977
Number of successful extensions: 4173
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4167
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)