Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0435.Seq
(598 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 48 1e-06
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 47 2e-06
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 46 3e-06
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 44 1e-05
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 43 4e-05
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 37 8e-04
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 38 0.001
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 31 0.13
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 29 0.52
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 27 2.1
SPAC1296.04 |mug65||spore wall assembly protein |Schizosaccharom... 27 2.7
SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 3.6
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 26 4.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 6.3
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 8.4
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 48.0 bits (109), Expect = 1e-06
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELLFSX 491
SL D L F A++L N Y C CK+L + K I P +L +H KRF S
Sbjct: 285 SLADSLKHFVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSS 344
Query: 492 KVAARVPSPST 524
K++ ++ P +
Sbjct: 345 KISKQISYPES 355
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 46.8 bits (106), Expect = 2e-06
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +3
Query: 309 VSLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELLFS 488
++L DCL F ++L ++ + C CK+ R K I P +L HLKRF E F
Sbjct: 825 ITLNDCLDEFEKTEQLGEEDPWYCPTCKEFRQASKQMEIWRCPEILIFHLKRFSSERRFR 884
Query: 489 XKVAARVPSP 518
K+ V P
Sbjct: 885 DKIDDLVEFP 894
Score = 40.3 bits (90), Expect = 2e-04
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 67 SIISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIPSRE 189
S+I D+F G S + C +C+ VS + F DL+LP+P ++
Sbjct: 457 SLIVDLFQGMYRSTLVCPVCNTVSITFDPFMDLTLPLPVKQ 497
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 46.4 bits (105), Expect = 3e-06
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRH 473
S+ CL +F +++ L N + C CK L+ K I LP +L +HLKRF++
Sbjct: 269 SVTSCLRSFSASEMLSSKNKFHCDVCKSLQEAEKRMKIKKLPKILSLHLKRFKY 322
Score = 43.6 bits (98), Expect = 2e-05
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +1
Query: 40 GDGSNVKYRSIISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIPSREHLAVLRC 210
G+ S+V + + +F+G L S +CL C+ +++R E+F DLS+ I H +V C
Sbjct: 219 GNHSDVMHPKWVHSLFEGTLTSETKCLTCENITSRDESFLDLSIDI--ENHTSVTSC 273
>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 44.4 bits (100), Expect = 1e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +3
Query: 306 VVSLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELLF 485
VVSLQ+CL F + + L+G + + C CK R+ K+ I LP L + ++RF+ ++
Sbjct: 265 VVSLQECLLKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKISVMG 324
Query: 486 SXKV 497
K+
Sbjct: 325 RKKI 328
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 64 RSIISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIPSREHLAVLR 207
+SI+ + F G L S QC+ C R ST F L++PI H+ L+
Sbjct: 222 KSIVVNNFVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVVSLQ 269
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 42.7 bits (96), Expect = 4e-05
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 294 FYGPVVSLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467
F+ ++L+DCL F ++L + + C CK R K I LP +L +HL RF
Sbjct: 685 FHMESITLEDCLLEFSKPEQLDLQDSWYCPGCKAFRPATKRLEIWRLPKILVIHLNRF 742
Score = 36.3 bits (80), Expect = 0.003
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 67 SIISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIPS 183
SII +F G S ++C IC + ST + F L+LP+P+
Sbjct: 426 SIIVQLFQGMYKSTLECSICYQKSTAFDPFMYLTLPLPT 464
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 37.1 bits (82), Expect = 0.002
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 70 IISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPI 177
+I +F G L S V C C+ ++ E QDLS+PI
Sbjct: 522 VIKSIFTGRLTSVVMCQSCNEITNTPEPIQDLSIPI 557
Score = 33.9 bits (74), Expect(2) = 8e-04
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGV 410
+L DCL F +EL G+NM++C C N V
Sbjct: 675 TLIDCLKNFTHVEELSGENMFACENCCNQPNEV 707
Score = 23.4 bits (48), Expect(2) = 8e-04
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 432 LPXVLCVHLKRFRHEL 479
LP V +HLKRF E+
Sbjct: 742 LPPVFIIHLKRFFQEI 757
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF-RHELLFS 488
+LQ CL F S ++++ YSC C +N +K LP +C+ LKRF ++ S
Sbjct: 299 TLQGCLERFVSKEKVQ----YSCHSCGS-KNAIKQLVFDKLPPTICMQLKRFEQNNFAMS 353
Query: 489 XKVAARVPSPS 521
K+ +V P+
Sbjct: 354 TKIDKQVSYPA 364
Score = 32.3 bits (70), Expect = 0.055
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 37 SGDGSNVKYRSIISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPI 177
SG G+++ I +F G L + V CL C + ++ D+SL I
Sbjct: 249 SGGGTSMPCTCPIHRIFSGSLKNVVTCLDCKKERVAVDPLMDISLDI 295
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 31.1 bits (67), Expect = 0.13
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 73 ISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIPSREHL 195
++D+F G + S V+C+ + S+R+E F D+ L + + L
Sbjct: 336 LNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNVKGMDTL 376
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 29.1 bits (62), Expect = 0.52
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +3
Query: 309 VSLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467
VS+ CL A D+++ Y+C CK + + P VL + RF
Sbjct: 481 VSIDQCLDATIQPDQME----YTCEACKSKLGATTTTAMKSFPKVLILQANRF 529
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSR--CKKLRNGVKLSGIVVLPXVLCVHLKRFRHE 476
+L+D ++ + L+GDN Y ++ + GV P +L + LKRF ++
Sbjct: 358 NLEDSFRSYIQVETLEGDNCYFADTYGFQEAKKGVIFES---FPPILHLQLKRFEYD 411
>SPAC1296.04 |mug65||spore wall assembly protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 24 KKRFIRRRQQREVPKHHIRRVRREXTISRSVP 119
++R+IR+R+++E+ + + V TIS S P
Sbjct: 107 RRRWIRKRKKKELRRDELPLVPESFTISSSYP 138
>SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 308
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 478 SSCRKRFKWTHSTSGSTTMPDSFTPLRNFLQR 383
S+ + KW+ + GS T DS +PL N +R
Sbjct: 130 SNASTKSKWSFTKHGSNTPSDSSSPLCNSSKR 161
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 25.8 bits (54), Expect = 4.8
Identities = 17/72 (23%), Positives = 38/72 (52%)
Frame = -1
Query: 589 TSQVLQHERCALFVRVRRXVQIVDGEGTLAATLXLNSSSCRKRFKWTHSTSGSTTMPDSF 410
T +LQ R ++ VR++ +I++GE + + + + K+ K T ++ T+ D
Sbjct: 111 TEALLQALRKSIGVRIKEETEIIEGE-VVEVQIDRSITGGNKQGKLTIRSTDMETVYDLG 169
Query: 409 TPLRNFLQREQL 374
T + + L +E++
Sbjct: 170 TKMIDSLTKEKV 181
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 334 PSSAPTNSKATTCTAAPAAR 393
PS AP NS +T AAP A+
Sbjct: 1258 PSPAPVNSATSTPVAAPTAQ 1277
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 334 PSSAPTNSKATTCTAAPAA 390
P+SA TN+ ATT T P A
Sbjct: 565 PTSASTNAAATTTTKKPKA 583
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,037,036
Number of Sequences: 5004
Number of extensions: 32124
Number of successful extensions: 105
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 105
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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