Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0435.Seq
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 49 2e-06
SB_8088| Best HMM Match : UCH (HMM E-Value=1.1e-20) 49 3e-06
SB_52467| Best HMM Match : UCH (HMM E-Value=2.6e-23) 48 6e-06
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_21866| Best HMM Match : UCH (HMM E-Value=0) 46 3e-05
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10) 43 2e-04
SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07) 40 0.001
SB_29469| Best HMM Match : UCH (HMM E-Value=6.7e-06) 38 0.008
SB_47787| Best HMM Match : DUF1556 (HMM E-Value=3.4) 36 0.019
SB_8927| Best HMM Match : UCH (HMM E-Value=0) 36 0.019
SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13) 36 0.025
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_52114| Best HMM Match : Galactosyl_T (HMM E-Value=3.5e-25) 29 2.2
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.8
SB_93| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
>SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHE 476
+LQD L F + + L+GDN Y C +C K R VK I LP VL + LKRF ++
Sbjct: 151 NLQDSLEQFVNGEILEGDNAYFCEKCNKRRTTVKRMCIKTLPPVLVIQLKRFGYD 205
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/70 (37%), Positives = 36/70 (51%)
Frame = +3
Query: 309 VSLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELLFS 488
+ LQDCL F +EL ++++ CS C R K + P L VHLKR+RH +
Sbjct: 1000 LQLQDCLRTFVDREEL--EDLWPCSMCNAQRTATKSLSVCRFPDTLIVHLKRYRHS---N 1054
Query: 489 XKVAARVPSP 518
K+ A V P
Sbjct: 1055 QKIMAPVDYP 1064
>SB_8088| Best HMM Match : UCH (HMM E-Value=1.1e-20)
Length = 379
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHE-LLFS 488
+L++C+ F + L D+ + C +CKK R K + LP L +HLKRF + +LF
Sbjct: 255 TLRECVELFTEPETLGEDDAWHCPKCKKHREATKQMSLWRLPDTLIIHLKRFSFKNILFR 314
Query: 489 XKVAARVPSP 518
K+ V P
Sbjct: 315 DKITKLVEFP 324
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 67 SIISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIPSREHL 195
SII D+F G L S + C +C +S + + F +LS+P+P L
Sbjct: 69 SIIVDMFQGQLKSKLTCPVCKTISIKYDPFMNLSVPLPKENKL 111
>SB_52467| Best HMM Match : UCH (HMM E-Value=2.6e-23)
Length = 422
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3
Query: 306 VVSLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRH 473
VV L DC+ F + ++L ++ + C +CKK + K + LP VL +HLKRF +
Sbjct: 245 VVQLNDCIQLFLTREKLGANDPWYCPQCKKHQQASKKFDLWCLPEVLVIHLKRFSY 300
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 303 PVVSLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELL 482
P +SL++ L FF + L+G N Y C RC+ L++ + I P L + LKRF + +
Sbjct: 712 PSISLEEMLGYFFEPEMLEGSNQYHCERCQGLQDAERSVVIANAPMFLVLTLKRFSYNVR 771
Query: 483 F--SXKVAARVPSPSTIWTXRLTRTKSAHRSCC 575
K+ V P+ + + S S C
Sbjct: 772 THERSKILQSVSYPARLQLSNVCVPPSRRNSVC 804
>SB_21866| Best HMM Match : UCH (HMM E-Value=0)
Length = 2165
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHE 476
SL D + F D L+G N Y C +C K + VK I LP V+ + LKRF ++
Sbjct: 1452 SLHDSMEQFVKGDLLEGANAYHCEKCDKKVDTVKRMCISKLPRVMAIQLKRFDYD 1506
>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2708
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 348 DELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELLFSXK 494
D L GDNMY+CS+C K K + VLP +LC + R+ ++ K
Sbjct: 1288 DTLDGDNMYTCSQCGKKVRAEKRACFTVLPRILCFNTMRYTFNMVTMMK 1336
>SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10)
Length = 1303
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 64 RSIISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIP 180
+SII D+F G L S V+C+ C VS R + F LSLP+P
Sbjct: 496 QSIIVDLFQGQLKSQVRCVECGYVSARFDPFTFLSLPLP 534
>SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07)
Length = 711
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 67 SIISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPI 177
+I+ ++F G L+ +CL C+ R E FQD+S+P+
Sbjct: 118 NIVEEMFQGRLVHETKCLTCENAKQRFEDFQDVSVPV 154
Score = 34.7 bits (76), Expect = 0.057
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467
+L+ ++ F + + LK +N Y C C + +LP VL +HLKRF
Sbjct: 183 TLEWAISQFATVEVLKDNNKYFCENCCTYTEARLSTFFDLLPQVLTLHLKRF 234
>SB_29469| Best HMM Match : UCH (HMM E-Value=6.7e-06)
Length = 757
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467
SL C+ F ++L DN Y C++C+ ++ + + LP VL + L RF
Sbjct: 136 SLNQCIKEFLKEEKLDCDNQYFCTQCQSKQDARRYIELKHLPPVLNLQLLRF 187
>SB_47787| Best HMM Match : DUF1556 (HMM E-Value=3.4)
Length = 382
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1
Query: 76 SDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIP 180
SD+F G L S + CL C S + F DLSLPIP
Sbjct: 347 SDLFVGVLKSTLICLECGFKSVTFDPFWDLSLPIP 381
>SB_8927| Best HMM Match : UCH (HMM E-Value=0)
Length = 316
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/46 (30%), Positives = 30/46 (65%)
Frame = +1
Query: 73 ISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIPSREHLAVLRC 210
+ ++F+G L + +CL C+ VS++ E+F DLS+ + ++ ++ C
Sbjct: 205 VHEMFEGTLTNETRCLCCESVSSKDESFLDLSVDV--EQNTSITHC 248
>SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13)
Length = 969
Score = 35.9 bits (79), Expect = 0.025
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNG 407
S+ CL+ F + + L G N ++C C K RNG
Sbjct: 701 SVMSCLSVFCAKETLTGKNKFACEECTKARNG 732
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 435 PXVLCVHLKRFRHELLFSXKVAARVPSP 518
P VL +HLKRF+ L KVA V P
Sbjct: 813 PLVLTLHLKRFQQVLFGLRKVAKHVDFP 840
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 67 SIISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIPSR 186
S + D+F SA+ C C + ST + F LSLPIP R
Sbjct: 2096 SFVLDLFQAQYRSALSCPKCKQKSTTFDPFLCLSLPIPQR 2135
>SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKK 395
+LQD L F + + L+GDN Y C +C K
Sbjct: 159 NLQDSLEQFVNGEILEGDNAYFCEKCNK 186
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 57 EVPKHHIRRVRREXTISRSVPNM*QGINENRNIPRLVAADPV 182
EVPK H RR T+SRS P +GI+E + ++A +PV
Sbjct: 22 EVPKSH----RRRPTVSRSRPKPDEGISEAVEVDIVIAGEPV 59
>SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +3
Query: 306 VVSLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELLF 485
V ++D L +EL+G ++CS+ + + VLP VL +HLKRF +
Sbjct: 524 VSCIEDALNHLTVKEELQG---FTCSKTNAQIDVSRRVSFEVLPKVLILHLKRFIYSKNG 580
Query: 486 SXKVAARVPSP 518
S K+ V P
Sbjct: 581 SQKLQKHVDYP 591
>SB_24189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 79 DVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIPSREHL 195
DV + +S ++C D VSTR+E F D+ L + ++++
Sbjct: 348 DVQELCRVSYIKCTKVDYVSTRLEPFYDIQLNVKGKKNI 386
>SB_52114| Best HMM Match : Galactosyl_T (HMM E-Value=3.5e-25)
Length = 383
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 49 SNVKYRSIISDVFDGXLLSAVQCLICDRVSTRIETFQDLSLPIPSREHLAVLRCQQ 216
S +K+R++ + G +L+ + CL + VSTRI+ + + L P R RC Q
Sbjct: 6 STLKHRNLPDENAVGLVLNKLLCL--NTVSTRIKRYHNFPLIGPIRLRQGCQRCSQ 59
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 7/32 (21%)
Frame = +3
Query: 321 DCLAAFFSADELK-------GDNMYSCSRCKK 395
DC AAFF+A ELK G+ Y+C C K
Sbjct: 614 DCDAAFFAAHELKKHSRRHTGEKPYACVNCNK 645
>SB_93| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Frame = +1
Query: 316 CKTVWPP-SSAPTNSKAT 366
C TVWPP +S+PTN AT
Sbjct: 2 CATVWPPTTSSPTNYTAT 19
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,908,618
Number of Sequences: 59808
Number of extensions: 282250
Number of successful extensions: 920
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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