Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0434.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    26   0.26 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    26   0.26 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   3.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.5  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 43  YTKKENCDLFNTEIIIIFRLHL 108
           Y +K N  +F T +++IF +HL
Sbjct: 120 YLEKRNRHIFRTSVLLIFVMHL 141


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 43  YTKKENCDLFNTEIIIIFRLHL 108
           Y +K N  +F T +++IF +HL
Sbjct: 120 YLEKRNRHIFRTSVLLIFVMHL 141


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -1

Query: 329 GYIWCLRS--QSKEINPVNKAQHFSRYLQNMTLGCDYSN 219
           G +W   S   +K I  +NK   F   LQN++L  +Y N
Sbjct: 89  GTVWINTSINGTKFIEFINKLIEFDVKLQNVSLIINYEN 127


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 241 VIFCKYRLKCWALF 282
           +IF  Y+L CW+ F
Sbjct: 541 MIFVTYQLYCWSSF 554


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,202
Number of Sequences: 336
Number of extensions: 2683
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)