Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0434.Seq
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73103-9|CAJ43433.1|  719|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z73103-8|CAA97429.1|  721|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U40946-3|AAO91681.1|  851|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z48006-2|CAA88050.1|  495|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z73103-9|CAJ43433.1|  719|Caenorhabditis elegans Hypothetical
           protein C08F8.2b protein.
          Length = 719

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 564 QYHW*GRRYPKASPDEPSVEVKSSPLCS 647
           QY W   R+P   PDEP V   S  L S
Sbjct: 615 QYMWLSMRFPDMLPDEPRVREASKHLDS 642


>Z73103-8|CAA97429.1|  721|Caenorhabditis elegans Hypothetical
           protein C08F8.2a protein.
          Length = 721

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 564 QYHW*GRRYPKASPDEPSVEVKSSPLCS 647
           QY W   R+P   PDEP V   S  L S
Sbjct: 617 QYMWLSMRFPDMLPDEPRVREASKHLDS 644


>U40946-3|AAO91681.1|  851|Caenorhabditis elegans Hypothetical
           protein W05H9.2 protein.
          Length = 851

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 323 IWCLRSQSKEINPVNKAQHFSR 258
           +W LR Q KE+  +NK  HF++
Sbjct: 520 LWHLRQQKKELKRLNKEIHFAK 541


>Z48006-2|CAA88050.1|  495|Caenorhabditis elegans Hypothetical
           protein F19C6.2a protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 554 VNSTISLVGPSISESFPRRA 613
           +N  I L+ P++SE FP+R+
Sbjct: 121 MNGVIHLISPTVSEKFPKRS 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,708,988
Number of Sequences: 27780
Number of extensions: 242995
Number of successful extensions: 453
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)