Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0433.Seq
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channe...    29   5.1  
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel...    29   5.1  
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel...    29   5.1  
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel...    29   5.1  
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel...    29   5.1  
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag...    29   5.1  
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu...    29   5.1  
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu...    29   5.1  
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu...    29   5.1  
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen...    29   5.1  

>U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channel,
            alpha subunitprotein 1, isoform f protein.
          Length = 1418

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 746  YDLLAKXGVNCMTXCMERPSM 684
            Y +L   G+NC+T  MERPS+
Sbjct: 1115 YTVLFFIGINCITLAMERPSI 1135


>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
            alpha subunitprotein 1, isoform c protein.
          Length = 1852

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 746  YDLLAKXGVNCMTXCMERPSM 684
            Y +L   G+NC+T  MERPS+
Sbjct: 1115 YTVLFFIGINCITLAMERPSI 1135


>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
            alpha subunitprotein 1, isoform a protein.
          Length = 1837

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 746  YDLLAKXGVNCMTXCMERPSM 684
            Y +L   G+NC+T  MERPS+
Sbjct: 1115 YTVLFFIGINCITLAMERPSI 1135


>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
            alpha subunitprotein 1, isoform d protein.
          Length = 1885

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 746  YDLLAKXGVNCMTXCMERPSM 684
            Y +L   G+NC+T  MERPS+
Sbjct: 1163 YTVLFFIGINCITLAMERPSI 1183


>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
            alpha subunitprotein 1, isoform e protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 746  YDLLAKXGVNCMTXCMERPSM 684
            Y +L   G+NC+T  MERPS+
Sbjct: 1122 YTVLFFIGINCITLAMERPSI 1142


>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
            sensitive calciumchannel alpha1 subunit isoform D
            protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 746  YDLLAKXGVNCMTXCMERPSM 684
            Y +L   G+NC+T  MERPS+
Sbjct: 1122 YTVLFFIGINCITLAMERPSI 1142


>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
            channel alpha1 subunitisoform C protein.
          Length = 1852

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 746  YDLLAKXGVNCMTXCMERPSM 684
            Y +L   G+NC+T  MERPS+
Sbjct: 1115 YTVLFFIGINCITLAMERPSI 1135


>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
            channel alpha1 subunitisoform B protein.
          Length = 1885

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 746  YDLLAKXGVNCMTXCMERPSM 684
            Y +L   G+NC+T  MERPS+
Sbjct: 1163 YTVLFFIGINCITLAMERPSI 1183


>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
            channel alpha1 subunitisoform A protein.
          Length = 1837

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 746  YDLLAKXGVNCMTXCMERPSM 684
            Y +L   G+NC+T  MERPS+
Sbjct: 1115 YTVLFFIGINCITLAMERPSI 1135


>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent
            calcium channelalpha13 subunit protein.
          Length = 1837

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 746  YDLLAKXGVNCMTXCMERPSM 684
            Y +L   G+NC+T  MERPS+
Sbjct: 1115 YTVLFFIGINCITLAMERPSI 1135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,450,095
Number of Sequences: 27780
Number of extensions: 355503
Number of successful extensions: 881
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)