Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0432.Seq
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   126   2e-31
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   107   1e-25
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   107   1e-25
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    26   0.40 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.7  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   6.5  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  126 bits (304), Expect = 2e-31
 Identities = 71/137 (51%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
 Frame = +3

Query: 81  NQRVMEHFIQVGQEEQRQGHQKRQPCRAEVAS*G*KSKE--SPVFQSPGQDRN*IIL*R* 254
           +Q+VM++FI++ +++ ++  +  +    ++     K+K   S V ++     N  +L   
Sbjct: 61  DQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIEN--LLADY 118

Query: 255 DFSETLTRAKFEELNMDLFRSTLKPVQKALEDADMLKKDVDAIVLVGGSTRIPKVQQLGK 434
           DFSETLTRAKFEELN D F  TLKPV+K LEDADM K  +D IVLVGGSTRIPK+QQL K
Sbjct: 119 DFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIPKIQQLIK 178

Query: 435 EFFNGKEPSRGINPDEA 485
           +FF+GKE +RGINPDEA
Sbjct: 179 DFFDGKELNRGINPDEA 195



 Score = 56.4 bits (130), Expect = 2e-10
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +2

Query: 2   SLLTIDNGVFEVVATNGDTHLGGEDFE 82
           S+LTIDNGVFEVVAT+GDTHLGGEDF+
Sbjct: 35  SILTIDNGVFEVVATSGDTHLGGEDFD 61


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  107 bits (257), Expect = 1e-25
 Identities = 50/77 (64%), Positives = 60/77 (77%)
 Frame = +3

Query: 255 DFSETLTRAKFEELNMDLFRSTLKPVQKALEDADMLKKDVDAIVLVGGSTRIPKVQQLGK 434
           D+S T+TRA+FE++NMD F+  + PV K L+DA + K  V  IVLVGGSTRIPKVQQL  
Sbjct: 120 DYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLIT 179

Query: 435 EFFNGKEPSRGINPDEA 485
           E+FNGKEP R INPDEA
Sbjct: 180 EYFNGKEPCRSINPDEA 196



 Score = 49.2 bits (112), Expect = 4e-08
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +2

Query: 2   SLLTIDNGVFEVVATNGDTHLGGEDFE 82
           SLLTI+ G+FEV AT GDTHLGGEDF+
Sbjct: 36  SLLTIEEGIFEVKATAGDTHLGGEDFD 62



 Score = 46.0 bits (104), Expect = 3e-07
 Identities = 22/45 (48%), Positives = 31/45 (68%)
 Frame = +1

Query: 118 KKNKGKDIRKDNRAVQKLRREVEKAKRALSSSHQVKIEIESFFEG 252
           KK    DI  + RA+++LR + E+AKR LSS+ Q  IEI+S F+G
Sbjct: 74  KKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDG 118


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  107 bits (257), Expect = 1e-25
 Identities = 50/77 (64%), Positives = 60/77 (77%)
 Frame = +3

Query: 255 DFSETLTRAKFEELNMDLFRSTLKPVQKALEDADMLKKDVDAIVLVGGSTRIPKVQQLGK 434
           D+S T+TRA+FE++NMD F+  + PV K L+DA + K  V  IVLVGGSTRIPKVQQL  
Sbjct: 120 DYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLIT 179

Query: 435 EFFNGKEPSRGINPDEA 485
           E+FNGKEP R INPDEA
Sbjct: 180 EYFNGKEPCRSINPDEA 196



 Score = 49.2 bits (112), Expect = 4e-08
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +2

Query: 2   SLLTIDNGVFEVVATNGDTHLGGEDFE 82
           SLLTI+ G+FEV AT GDTHLGGEDF+
Sbjct: 36  SLLTIEEGIFEVKATAGDTHLGGEDFD 62



 Score = 46.0 bits (104), Expect = 3e-07
 Identities = 22/45 (48%), Positives = 31/45 (68%)
 Frame = +1

Query: 118 KKNKGKDIRKDNRAVQKLRREVEKAKRALSSSHQVKIEIESFFEG 252
           KK    DI  + RA+++LR + E+AKR LSS+ Q  IEI+S F+G
Sbjct: 74  KKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDG 118


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -2

Query: 540 SVSCSPLSTPAAQQHHMRQPHQG*FHEMAPC 448
           S+ C P          +R   +G FHE  PC
Sbjct: 60  SICCGPFGCLVGTPETLRCQREGFFHEREPC 90


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 720 GRSPLVHLDSDSVFGCHWQ*RRSEIS*LECPVLRG 616
           GR+ +  LD+ S +    + +R + +  +CPV RG
Sbjct: 464 GRAVVPTLDATSYYAKDLEKQRQQCNQNKCPVKRG 498


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 616 NEFGHHSTDSFNTHGQRVDI 557
           +E G+H+ +S +  G+ VDI
Sbjct: 41  DEEGYHTPESLHYEGRAVDI 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,732
Number of Sequences: 336
Number of extensions: 4200
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)