Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0432.Seq
(796 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 169 2e-42
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 2e-30
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 121 8e-28
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 120 1e-27
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 2e-23
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 102 4e-22
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 100 3e-21
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-10
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_22845| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 31 1.4
SB_55365| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_7100| Best HMM Match : zf-DBF (HMM E-Value=2.6e-09) 29 5.7
SB_437| Best HMM Match : Peptidase_A17 (HMM E-Value=0.00012) 29 5.7
SB_12784| Best HMM Match : ADAM_spacer1 (HMM E-Value=1.4e-23) 28 7.6
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 28 7.6
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 169 bits (412), Expect = 2e-42
Identities = 115/244 (47%), Positives = 143/244 (58%), Gaps = 6/244 (2%)
Frame = +3
Query: 81 NQRVMEHFIQVGQEEQ----RQGHQKRQPCRAEVAS*G*KSKESPVFQSPGQDRN*IIL* 248
+Q VMEHFI++ ++++ R+ ++ Q R EV K+K + Q +
Sbjct: 931 DQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVE----KAKRALSTQHQARVEIESFFE 986
Query: 249 R*DFSETLTRAKFEELNMDLFRSTLKPVQKALEDADMLKKDVDAIVLVGGSTRIPKVQQL 428
DFSE LTRA+FEELN LF+STLKPVQK LEDAD+ K ++ IVLVGGSTRIPKVQQL
Sbjct: 987 GEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKSEIHEIVLVGGSTRIPKVQQL 1046
Query: 429 GKEFFNGKEPSRGINPDEAVAYGAAVQLGYSVVNKIXXXXXXXXXXXXPWVLKLSVE*CP 608
K+FF GKEPSRGINPDEAVAYGAAVQ G V+ P L +
Sbjct: 1047 VKDFFEGKEPSRGINPDEAVAYGAAVQAG--VLGGEEDTGEVVLLDVNPLTLGIETVGGV 1104
Query: 609 NSFLVTLG--IPTKKSQIFSTASDNQTHCHYPSVRGVNDH*PRTSFYLGKFGLYLGIPSW 782
+ L++ IPTKKSQ+FSTA+DNQ G + + LGKF L GIP
Sbjct: 1105 MTKLISRNTVIPTKKSQVFSTAADNQNTVTIQVFEGERPM-TKDNHPLGKFDLN-GIPP- 1161
Query: 783 LPRG 794
PRG
Sbjct: 1162 APRG 1165
Score = 72.5 bits (170), Expect = 4e-13
Identities = 39/75 (52%), Positives = 50/75 (66%)
Frame = +2
Query: 509 AGVLSGEQDTDAIVLLDVNPLTMGIETVRGMMSKLIPRNTGHSN*EISDLLYCQ*QPNTL 688
AGVL GE+DT +VLLDVNPLT+GIETV G+M+KLI RNT + NT+
Sbjct: 1074 AGVLGGEEDTGEVVLLDVNPLTLGIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQNTV 1133
Query: 689 SLSKCTRGERPLTKD 733
++ + GERP+TKD
Sbjct: 1134 TI-QVFEGERPMTKD 1147
Score = 59.3 bits (137), Expect = 4e-09
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 2 SLLTIDNGVFEVVATNGDTHLGGEDFE 82
SLLTIDNGVFEVVATNGDTHLGGEDF+
Sbjct: 905 SLLTIDNGVFEVVATNGDTHLGGEDFD 931
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 130 bits (313), Expect = 2e-30
Identities = 81/183 (44%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Frame = +3
Query: 255 DFSETLTRAKFEELNMDLFRSTLKPVQKALEDADMLKKD-VDAIVLVGGSTRIPKVQQLG 431
DF ++TRA+FEE+N LF+ TL+PV+KA++D+ + K+ +D IV+VGGSTRIPK+Q L
Sbjct: 385 DFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLL 444
Query: 432 KEFFNGKEPSRGINPDEAVAYGAAVQLGYSVVNKIXXXXXXXXXXXXPWVLKLSVE*CPN 611
+ FFNGKE ++ INPDEAVAYGAAVQ +K P L L
Sbjct: 445 QNFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDVAPLTLGLETAGGVM 504
Query: 612 SFLV--TLGIPTKKSQIFSTASDNQTHCHYPSVRGVNDH*PRTSFYLGKFGLYLGIPSWL 785
+ + IPTK++Q F+T SDNQT G + + LGKF L GIP
Sbjct: 505 TAAIKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSL-TKDNNLLGKFEL-SGIPP-A 561
Query: 786 PRG 794
PRG
Sbjct: 562 PRG 564
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/27 (66%), Positives = 26/27 (96%)
Frame = +2
Query: 2 SLLTIDNGVFEVVATNGDTHLGGEDFE 82
S+L+I++G+FEV +T+GDTHLGGEDF+
Sbjct: 301 SVLSIEDGIFEVKSTHGDTHLGGEDFD 327
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +1
Query: 118 KKNKGKDIRKDNRAVQKLRREVEKAKRALSSSHQVKIEIESFFEG 252
K+ KDI + RA+++LR E+AKR LSSS Q IEI+S ++G
Sbjct: 339 KQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDG 383
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 121 bits (291), Expect = 8e-28
Identities = 78/184 (42%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
Frame = +3
Query: 255 DFSETLTRAKFEELNMDLFRSTLKPVQKALEDADML--KKDVDAIVLVGGSTRIPKVQQL 428
DF ++TRA+FEELN DLF+ T +PV++A+ D+ + K+ + IVLVGGSTRIPK+Q++
Sbjct: 292 DFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKM 351
Query: 429 GKEFFNGKEPSRGINPDEAVAYGAAVQLGYSVVNKIXXXXXXXXXXXXPWVLKLSVE*CP 608
+E F GKE ++ INPDEAVAYGAAVQ +K P + +
Sbjct: 352 LQELFGGKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDVAPLSMGIETAGGV 411
Query: 609 NSFLVTLG--IPTKKSQIFSTASDNQTHCHYPSVRGVNDH*PRTSFYLGKFGLYLGIPSW 782
S L+ IPTK++Q F+T SDNQ G + LGKF L GIP
Sbjct: 412 MSVLIKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNL-LGKFEL-TGIPP- 468
Query: 783 LPRG 794
PRG
Sbjct: 469 APRG 472
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +1
Query: 118 KKNKGKDIRKDNRAVQKLRREVEKAKRALSSSHQVKIEIESFFEG 252
K+ KDI + RA+++LR E+AKR LSSS Q IEI+S FEG
Sbjct: 246 KQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEG 290
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = +2
Query: 2 SLLTIDNGVFEVVATNGDTHLGGEDFE 82
S+LTI++G+FEV +T GDTHLGGEDF+
Sbjct: 208 SVLTIEDGIFEVKSTAGDTHLGGEDFD 234
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 120 bits (289), Expect = 1e-27
Identities = 79/184 (42%), Positives = 102/184 (55%), Gaps = 4/184 (2%)
Frame = +3
Query: 255 DFSETLTRAKFEELNMDLFRSTLKPVQKALEDADMLKKDVDAIVLVGGSTRIPKVQQLGK 434
DF ++RA+FE+L DLF S L PV KAL DA K D+ +VLVGGSTR+PK+Q++ +
Sbjct: 293 DFYTKISRARFEDLCSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLE 352
Query: 435 EFFNGKEPSRGINPDEAVAYGAAVQLGYSVVNKIXXXXXXXXXXXXPWVLKLSVE*CPNS 614
E+F+GK ++ INPDEAVAYGAAVQ +K P L + +
Sbjct: 353 EYFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDVAPLSLGIETAGEVMT 412
Query: 615 FLV--TLGIPTKKSQIFSTASDNQTHCHYPSVRGVNDH*PRTSF--YLGKFGLYLGIPSW 782
L+ IPTK +Q F+T SDNQ ++R P T LGKF L GIP
Sbjct: 413 KLIERNARIPTKATQTFTTYSDNQPAV---TIRVFEGERPLTKHNNLLGKFDL-SGIPP- 467
Query: 783 LPRG 794
PRG
Sbjct: 468 APRG 471
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = +1
Query: 118 KKNKGKDIRKDNRAVQKLRREVEKAKRALSSSHQVKIEIESFFEG 252
K+ KD+ K++RA+++LR E+AKR LSSS + IE++S FEG
Sbjct: 247 KRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEG 291
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +2
Query: 2 SLLTIDNG-VFEVVATNGDTHLGGEDFEPESHGTLHSSWTRRTKARTSEKT 151
S+LTID+G +FEV +T GDTHLGGEDF+ + + R+ K S+ +
Sbjct: 208 SILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNS 258
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 106 bits (254), Expect = 2e-23
Identities = 73/179 (40%), Positives = 101/179 (56%), Gaps = 4/179 (2%)
Frame = +3
Query: 270 LTRAKFEELNMDLFRSTLKPVQKALEDADMLKKDVDAIVLVGGSTRIPKVQQLGKEFFNG 449
L+R+KFE L DL T+ P +K L+DA++ K ++ ++LVGG TR+PKVQQ ++ F G
Sbjct: 108 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 166
Query: 450 KEPSRGINPDEAVAYGAAVQLGYSVVNKIXXXXXXXXXXXXPWVLKLSVE*CPNSF--LV 623
+ PS+ +NPDEAVA GAA+Q G + L L +E F L+
Sbjct: 167 RVPSKAVNPDEAVAIGAAIQGG------VLAGDVKDVLLLDVTPLSLGIETLGGVFTKLI 220
Query: 624 TLG--IPTKKSQIFSTASDNQTHCHYPSVRGVNDH*PRTSFYLGKFGLYLGIPSWLPRG 794
T IPTKKSQ+FSTA+D QT +G + + LG+F L +GIP PRG
Sbjct: 221 TRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREM-AIDNKLLGQFQL-VGIPP-APRG 276
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 2 SLLTIDNGVFEVVATNGDTHLGGEDFE 82
S+L I GVFEV ATNGDT+LGGEDF+
Sbjct: 15 SILEIQKGVFEVKATNGDTYLGGEDFD 41
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 512 GVLSGEQDTDAIVLLDVNPLTMGIETVRGMMSKLIPRNT 628
GVL+G D ++LLDV PL++GIET+ G+ +KLI RNT
Sbjct: 188 GVLAG--DVKDVLLLDVTPLSLGIETLGGVFTKLITRNT 224
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +1
Query: 118 KKNKGKDIRKDNRAVQKLRREVEKAKRALSSSHQVKIEIESFFEGETSLKHSPELNLK 291
KK G D+ KD+ A+Q+LR EKAK LSSS Q I + + KH LN+K
Sbjct: 53 KKESGVDLSKDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKH---LNMK 107
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 102 bits (244), Expect = 4e-22
Identities = 63/151 (41%), Positives = 87/151 (57%), Gaps = 4/151 (2%)
Frame = +3
Query: 270 LTRAKFEELNMDLFRSTLKPVQKALEDADMLKKDVDAIVLVGGSTRIPKVQQLGKEFFNG 449
L+R+KFE L DL T+ P +K L+DA++ K ++ ++LVGG TR+PKVQQ ++ F G
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-G 111
Query: 450 KEPSRGINPDEAVAYGAAVQLGYSVVNKIXXXXXXXXXXXXPWVLKLSVE*CPNSF--LV 623
+ PS+ +NPDEAVA GAA+Q G + L L +E F L+
Sbjct: 112 RVPSKAVNPDEAVAIGAAIQGG------VLAGDVKDVLLLDVTPLSLGIETLGGVFTKLI 165
Query: 624 TLG--IPTKKSQIFSTASDNQTHCHYPSVRG 710
T IPTKKSQ+FSTA+D QT +G
Sbjct: 166 TRNTTIPTKKSQVFSTAADGQTQVEIKVFQG 196
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 512 GVLSGEQDTDAIVLLDVNPLTMGIETVRGMMSKLIPRNT 628
GVL+G D ++LLDV PL++GIET+ G+ +KLI RNT
Sbjct: 133 GVLAG--DVKDVLLLDVTPLSLGIETLGGVFTKLITRNT 169
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 99.5 bits (237), Expect = 3e-21
Identities = 42/86 (48%), Positives = 66/86 (76%)
Frame = +3
Query: 258 FSETLTRAKFEELNMDLFRSTLKPVQKALEDADMLKKDVDAIVLVGGSTRIPKVQQLGKE 437
F ET++R FE +N DLF+ L+P+++ L + ++ K++VD +VLVGGSTR+PK++QL +E
Sbjct: 326 FKETISRKMFETINEDLFKKVLQPIRRVLAEVELPKEEVDEVVLVGGSTRVPKIRQLIQE 385
Query: 438 FFNGKEPSRGINPDEAVAYGAAVQLG 515
FF+GK P+ I+P+ AVA G ++Q G
Sbjct: 386 FFDGKPPNVAIDPELAVATGVSIQAG 411
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 2 SLLTIDNGVFEVVATNGDTHLGGEDF 79
SLL I G+F +A G+ LGG+DF
Sbjct: 237 SLLNIQGGMFVTMAMAGNNRLGGQDF 262
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 72.1 bits (169), Expect = 5e-13
Identities = 37/93 (39%), Positives = 51/93 (54%)
Frame = +3
Query: 255 DFSETLTRAKFEELNMDLFRSTLKPVQKALEDADMLKKDVDAIVLVGGSTRIPKVQQLGK 434
DF +TR + EE+ DLF PV +AL+ A M D+D++VLVGG R+PKVQ
Sbjct: 276 DFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDIDSVVLVGGGIRVPKVQDALL 335
Query: 435 EFFNGKEPSRGINPDEAVAYGAAVQLGYSVVNK 533
E ++ IN DEA A G +L + V +
Sbjct: 336 RAVKKPELAKNINADEAAALGMPARLPMNYVQR 368
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +3
Query: 381 IVLVGGSTRIPKVQQLGKEFFNGKEPSRGINPDEAVAYGAAVQ 509
++LVGG+TR PK+QQL K +F GKE R I+PDE VAYGAAVQ
Sbjct: 43 VILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQ 85
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 48.0 bits (109), Expect = 9e-06
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 366 KDVDAIVLVGGSTRIPKVQQLGKEFFNGKEPSRGINPDEAVAYGAAVQ 509
+++D++ +VGGSTRIP ++ + K F GKE +N DEAVA G A+Q
Sbjct: 5 EEIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADEAVARGCALQ 51
>SB_22845| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1422
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 149 TTVPCRSCVVRLKKQREPCLPVTRSRSKLNHSLKV 253
TTV C C V+ K RE CLPV+RS + L+ +V
Sbjct: 694 TTVICYLCGVQ--KPRESCLPVSRSIATLSAGFRV 726
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/82 (23%), Positives = 39/82 (47%)
Frame = +2
Query: 2 SLLTIDNGVFEVVATNGDTHLGGEDFEPESHGTLHSSWTRRTKARTSEKTTVPCRSCVVR 181
+LL++ NG+++V+AT D LGG +F+ L + + R+ + + + +
Sbjct: 169 TLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKWKIDPLTNKRSKTK 228
Query: 182 LKKQREPCLPVTRSRSKLNHSL 247
L+ E C + + N S+
Sbjct: 229 LQTSAEQCKNILSTLESANCSV 250
>SB_55365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 2 SLLTIDNGVFEVVATNGDTHLGGEDFEPESHG 97
S + + +G VVA GDT LG D E S G
Sbjct: 130 SSMALSSGKVTVVARRGDTSLGDRDDEATSEG 161
>SB_7100| Best HMM Match : zf-DBF (HMM E-Value=2.6e-09)
Length = 242
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 83 PESHGTLHSSWTRRTKARTSEKTTVPCRSCVVRLKKQR-EPCLPVTRSRSKLNH 241
P +G +T+A++S R CV R +QR E TRS K +
Sbjct: 129 PPGYGPFDDVTAPKTRAKSSSSEPRQARKCVTRSPRQRAEQARKATRSTGKAGY 182
>SB_437| Best HMM Match : Peptidase_A17 (HMM E-Value=0.00012)
Length = 592
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 546 IASVSCSPLSTPAAQQHHMRQPHQG*FHEMA 454
I +S PLS+P Q H R H G H MA
Sbjct: 330 IVLLSGHPLSSPIVQDFHQRNRHVGREHTMA 360
>SB_12784| Best HMM Match : ADAM_spacer1 (HMM E-Value=1.4e-23)
Length = 571
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 594 RTVSIPMVRGLTSSKTIASVSCSPLSTPAAQQHHMRQPHQG*FHEMAP 451
R+ SI V GL+S+ TIA + P H+M G ++ MAP
Sbjct: 124 RSCSIVEVTGLSSAFTIAHELAHVFNVPHDGDHNMCDEKSGNYNLMAP 171
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 106 FKLDKKNKGKDIRKDNRAVQKLRREVEKAKRALSSSH 216
+K + K K++++ V KL+ EVE +KR ++S+H
Sbjct: 1274 YKNEIMGKEKEMQQLRTQVFKLQEEVEASKREITSAH 1310
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,843,169
Number of Sequences: 59808
Number of extensions: 565973
Number of successful extensions: 1677
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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