Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0430.Seq
(797 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20385| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 8e-29
SB_19150| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_34114| Best HMM Match : Transthyretin (HMM E-Value=1.1e-13) 31 1.4
SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38) 31 1.4
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 29 3.3
SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_53807| Best HMM Match : MCM (HMM E-Value=0) 29 4.4
SB_52566| Best HMM Match : Baculo_FP (HMM E-Value=1.7) 29 5.8
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_46729| Best HMM Match : DUF646 (HMM E-Value=1.9) 28 7.6
SB_39887| Best HMM Match : DUF1127 (HMM E-Value=3.2) 28 7.6
SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18) 28 7.6
SB_54513| Best HMM Match : Mod_r (HMM E-Value=0.23) 28 7.6
SB_27389| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_6471| Best HMM Match : HALZ (HMM E-Value=7) 28 7.6
SB_936| Best HMM Match : DUF1127 (HMM E-Value=3.2) 28 7.6
>SB_20385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 124 bits (299), Expect = 8e-29
Identities = 55/85 (64%), Positives = 70/85 (82%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 KATRLEKDAKRHWDLFYKRNETKFFRDRHWTTREFQELINFDPEQ--QIVYLELGCGVGN 429
K +LE+DA+++WDLFYKRN T FF+DR WTTREF EL+N + E+ + V LE GCGVGN
Sbjct: 388 KRNKLEQDARKNWDLFYKRNSTNFFKDRRWTTREFTELLNVEDEKLNEKVLLEAGCGVGN 447
Query: 430 MIFPLVEEGFTNFFFYACDFSPRAV 504
+I PL+EEG+ NF+F+ACDFSPRAV
Sbjct: 448 LINPLLEEGY-NFYFHACDFSPRAV 471
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +3
Query: 510 VKRNSLYDKNRMKAFCADLTTEDLFENIQENSIDIASLIFVLSA 641
VK + YD+ ++ AF DLT +DL ENI S+DIA+LIFVLSA
Sbjct: 474 VKESPFYDEAKVNAFQCDLTKDDLLENIPACSVDIATLIFVLSA 517
>SB_19150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 346 TTREFQELINFDPEQQIVYLELGCGVGNMIFPLVEEGFTNFFFYACDFSPRAVELSNVTA 525
TT+EF E++N P Q++ L++GCG+G F +++ A D S +E+ A
Sbjct: 42 TTKEFVEMLNLAPGQKV--LDVGCGIGGSAFYMIKNFHVE--VRAVDLSTNMIEIGKQRA 97
>SB_34114| Best HMM Match : Transthyretin (HMM E-Value=1.1e-13)
Length = 626
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 149 VEETSSSDTFVHRLKELSQEEI-KLLQNQNTRLVPEAKR 262
VE + SD+F+ R + S+EEI +LL+ ++TR +A R
Sbjct: 31 VESPTCSDSFLGRFGDSSEEEIQRLLEERSTRNTKKANR 69
>SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38)
Length = 1354
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 71 FI*LHNLDKVTYIKNRIKMETDIPAHV-EETSSSDTFVHRLKELSQEEIKLLQNQNTRLV 247
F LHN+ +++ R K+E +PA V + ++ L E +++ +QN RL+
Sbjct: 253 FFWLHNIKRISQFLARDKVEMVLPAFVTSRIDYCNGLLYGLPEREMGKLQRVQNAAARLL 312
Query: 248 PEAKRLD 268
K+ D
Sbjct: 313 TSCKKHD 319
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 206 LVTVLSACERMCHCCLFLQH 147
L+ V C R+C+CCLF H
Sbjct: 168 LIYVTQWCRRVCYCCLFDSH 187
>SB_56575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/65 (27%), Positives = 38/65 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAKRLDW 271
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K +
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDMLTKKVKFLESRNTSLETENKLI-- 72
Query: 272 KKMLN 286
K+ LN
Sbjct: 73 KRELN 77
>SB_53807| Best HMM Match : MCM (HMM E-Value=0)
Length = 789
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = -2
Query: 637 DSTKIKLAMSIEFSWMFSNKSSVVKSAQKAFMRFLSYKLLRLTILLHVVK 488
D + + + +E S++ + K SV+++ +KAF +L+Y+ +LL V+K
Sbjct: 674 DDVNMAIRVMLE-SFIDTQKFSVMRNMKKAFSHYLAYRRDNNELLLFVLK 722
>SB_52566| Best HMM Match : Baculo_FP (HMM E-Value=1.7)
Length = 350
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 16 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILSKKVKFLESRNTSLETENK 68
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 28.7 bits (61), Expect = 5.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 638 CIQPAAWGPRGRRWALPW 691
C++P A GPR +W +PW
Sbjct: 1212 CVKPVA-GPRAGKWPMPW 1228
>SB_46729| Best HMM Match : DUF646 (HMM E-Value=1.9)
Length = 202
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKKVKFLESRNTSLETENK 70
>SB_39887| Best HMM Match : DUF1127 (HMM E-Value=3.2)
Length = 224
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDMLTKKVKFLESRNTSLETENK 70
>SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)
Length = 521
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 257 LLRVQDVYFDFVRALFLLVTVLSACERMCHC 165
+LRV V +R +F+ + VL C R C C
Sbjct: 87 ILRVMFVSLYILRVMFVSLFVLCTCHRACSC 117
>SB_54513| Best HMM Match : Mod_r (HMM E-Value=0.23)
Length = 603
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 416 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKKVKFLESRNTSLETENK 468
>SB_27389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKKVKFLESRNTSLETENK 70
>SB_6471| Best HMM Match : HALZ (HMM E-Value=7)
Length = 108
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKKVKFLESRNTSLETENK 70
>SB_936| Best HMM Match : DUF1127 (HMM E-Value=3.2)
Length = 280
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +2
Query: 92 DKVTYIKNRIKMETDIPAHVEETSSSDTFVHRLKELSQEEIKLLQNQNTRLVPEAK 259
+K+ +K+ +K D+ + + E +S F+H ++ +++K L+++NT L E K
Sbjct: 18 EKLRPMKSSLK---DLSSQLAEAVNSLAFLHDQCDILTKKVKFLESRNTSLETENK 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,772,015
Number of Sequences: 59808
Number of extensions: 504003
Number of successful extensions: 1371
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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