Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0430.Seq
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35604-5|CAA84680.2|  269|Caenorhabditis elegans Hypothetical pr...    97   2e-20
AL132949-36|CAJ58501.1|  311|Caenorhabditis elegans Hypothetical...    77   2e-14
Z93394-1|CAB07703.1|  369|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U70849-12|AAF99920.2|  236|Caenorhabditis elegans Hypothetical p...    30   2.2  

>Z35604-5|CAA84680.2|  269|Caenorhabditis elegans Hypothetical
           protein ZK1058.5 protein.
          Length = 269

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 49/113 (43%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
 Frame = +1

Query: 175 IRSQAERTVTRRNKALTKSKYTSCTRSKATRLEKDAKRHWDLFYKRNETKFFRDRHWTTR 354
           + SQ+ R +T  +     +K TS +  K  +LE DA+++WD FY RN+  FF+DR+W+  
Sbjct: 8   LSSQSSRELTEDDHEKL-AKQTSISDFKRNKLEIDARKNWDKFYHRNKNNFFKDRNWSAE 66

Query: 355 EFQELI-NFDPEQQIVYLELGCGVGNMIFPLVEEGFTNFFFYACDFSPRAVEL 510
           + + +  + D E++I YLE GCGVGNM+FPLV E   N   +A DFS  AV+L
Sbjct: 67  DLKMMCPDIDFEKEISYLEAGCGVGNMLFPLVAE-IPNLKLFAFDFSDNAVKL 118


>AL132949-36|CAJ58501.1|  311|Caenorhabditis elegans Hypothetical
           protein Y53F4B.42 protein.
          Length = 311

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
 Frame = +1

Query: 256 KATRLEKDAKRHWDLFYKRNETKFFRDRHWTTREFQELINFDPE-----QQIVYLELGCG 420
           KA RL       WD FY  NE +FF+DR+W  +EF EL N + E     ++I  LE+GCG
Sbjct: 69  KAMRLLSTPADQWDAFYAHNENRFFKDRNWLLKEFPEL-NVEDESNLQKEKIEILEVGCG 127

Query: 421 VGNMIFPL--VEEGFTNFFFYACDFSPRAVEL 510
           VGN  FPL  V    +    ++CD++P A+ +
Sbjct: 128 VGNTTFPLLQVNNSSSRLMLHSCDYAPNAIRV 159



 Score = 31.9 bits (69), Expect = 0.55
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +3

Query: 504 RIVKRNSLYDKNRMKAFCADLTTEDLFENIQENSIDIASLIFVLSA 641
           R++K    YD  +M AF  D+T     E     S+D    I+VLSA
Sbjct: 158 RVLKSQDAYDPEKMNAFVWDITQPASQEAPNVGSLDYIVCIYVLSA 203


>Z93394-1|CAB07703.1|  369|Caenorhabditis elegans Hypothetical
           protein Y48E1C.2 protein.
          Length = 369

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 382 PEQQIVYLELGCGVGNMIFPLVEEGFT 462
           P   +  L  GCG+G + + L+E+GFT
Sbjct: 152 PRHNVRILVPGCGLGRLAYDLMEQGFT 178


>U70849-12|AAF99920.2|  236|Caenorhabditis elegans Hypothetical
           protein F29B9.1 protein.
          Length = 236

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = +1

Query: 349 TREFQELINFDPEQQIVYLELGCGVGNMIFPLVEEGFTNFFFYACDFSPRAVELS 513
           TR  + LI+    +    L+LGCG G+++  L  +GF +      D+  +AV+LS
Sbjct: 50  TRIVKYLIDSKTGKDAKILDLGCGNGSVLRKLRSKGFQS--LKGVDYCQKAVDLS 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,784,981
Number of Sequences: 27780
Number of extensions: 382667
Number of successful extensions: 1028
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)