Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0429.Seq
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    26   0.32 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.2  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   9.2  

>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 18/67 (26%), Positives = 29/67 (43%)
 Frame = -3

Query: 785 HTRHCR*TNGSSPHTVGVC*LQVLKQIS*SASLSIQYVSSVFSTNWWTDSVALYGSTTVS 606
           + +  R   G  P  VGV  + VL  IS  + + + +    +   +WTD    YG     
Sbjct: 52  YDKRVRPNYGGPPVEVGVT-MYVLS-ISSLSEVKMDFTLDFYFRQFWTDPRLAYGKRPGV 109

Query: 605 ETFGLGT 585
           ET  +G+
Sbjct: 110 ETLSVGS 116


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 158 VRDYFPELCSDLIPALTRLDVDDFPHDCTKNLEPPESNIK 39
           V D  P LC+ LI +   L  D        NL+  + N+K
Sbjct: 41  VEDIDPTLCTHLIYSFVGLGDDSRIKHLEPNLDVNQGNLK 80


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +3

Query: 120  NQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKT 257
            N+I  + W V  D  G     AY GD  +  E I    ++A   KT
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKAEYIKT 956


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/18 (44%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
 Frame = -1

Query: 451 CFFSNYIQYR--INQFSP 404
           C+++N+ QYR  I +F+P
Sbjct: 91  CYYTNWSQYRVKIGKFTP 108


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 2    FFFYMIKFSKV 34
            +FFY++KF KV
Sbjct: 1028 YFFYLVKFYKV 1038


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 2   FFFYMIKFSKV 34
           +FFY++KF KV
Sbjct: 309 YFFYLVKFYKV 319


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = -1

Query: 574 YS*YDLDTLHGFWKSKDSPYQISTSSQRMS*LKTLQTIAAFCFFSNYI 431
           Y  +DL  ++G      +   I+T  Q ++ L +      +C FS ++
Sbjct: 302 YIVFDLLQVYGHIPKTQTNIAIATLIQSLAPLNSAANPVIYCLFSTHL 349


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +1

Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 624
           SG G+L  ++     PD+  +   ++P+P  S+    P
Sbjct: 166 SGEGSLQENRYYNNSPDQYQSYQILLPTPTCSEASSSP 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,166
Number of Sequences: 336
Number of extensions: 5147
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)