Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0429.Seq
(844 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 156 3e-39
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 109 5e-25
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 108 8e-25
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 85 2e-17
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 29 0.82
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 29 0.82
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 28 1.9
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 5.8
SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 s... 26 5.8
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 26 5.8
SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 7.7
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 26 7.7
SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22 |Schiz... 26 7.7
SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 7.7
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 156 bits (379), Expect = 3e-39
Identities = 69/87 (79%), Positives = 78/87 (89%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV+VDLEPGTMD+V+SG FG +FRPDN ++GQS AGN WAKGHYTEGAEL D+V
Sbjct: 57 GKYVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAV 116
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LDVVR+EAE CD LQGFQLTHSLGGGT
Sbjct: 117 LDVVRREAEACDALQGFQLTHSLGGGT 143
Score = 127 bits (306), Expect = 2e-30
Identities = 66/115 (57%), Positives = 77/115 (66%)
Frame = +1
Query: 472 GFSANSFSGRRY*SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQ 651
GF G SGMG LL+SKIREEYPDR+M TFSV P+PK SDTVVEPYNATLS+HQ
Sbjct: 132 GFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQ 191
Query: 652 LVENTDETYCIDNEALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
LVEN+DET+CIDNEAL I T ++P+ L V +F FPG+L
Sbjct: 192 LVENSDETFCIDNEALSSIFANTLKIKSPSYDDLNHLVSAVMAGVTTSFRFPGEL 246
Score = 99.5 bits (237), Expect = 5e-22
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGK 254
MREIVHIQAGQCGNQ+GA FW I+DEHG+D+ G Y G S+ Q ER+NVY+NEA+GGK
Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIYHGTSEAQHERLNVYFNEAAGGK 58
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 109 bits (262), Expect = 5e-25
Identities = 45/88 (51%), Positives = 65/88 (73%)
Frame = +2
Query: 245 RGQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDS 424
+G+ VPR++ VDLEP +D VR+GP+ +F P+ V G+ +A NN+A+GHYT G E++DS
Sbjct: 62 QGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDS 121
Query: 425 VLDVVRKEAEGCDCLQGFQLTHSLGGGT 508
VL+ +R+ A+ C LQGF + HS GGGT
Sbjct: 122 VLERIRRMADNCSGLQGFLVFHSFGGGT 149
Score = 81.4 bits (192), Expect = 1e-16
Identities = 40/102 (39%), Positives = 59/102 (57%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SG+G LL+ ++ EY + FSV P+P+VS +VVEPYN+ L+ H ++N+D T+ +DN
Sbjct: 151 SGLGALLLERLNMEYGKKSNLQFSVYPAPQVSTSVVEPYNSVLTTHATLDNSDCTFMVDN 210
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EA YDIC R + PT L + + + F G L
Sbjct: 211 EACYDICRRNLDIERPTYENLNRLIAQVVSSITASLRFAGSL 252
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASG 248
MRE++ + GQ G QIG WE+ EHGI G + +S ++ + N Y N+ G
Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDGFPTENS--EVHKNNSYLNDGFG 54
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 108 bits (260), Expect = 8e-25
Identities = 46/93 (49%), Positives = 65/93 (69%)
Frame = +2
Query: 245 RGQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDS 424
+G+ VPR++ VDLEP +D VR+GP+ +F P+ + G+ +A NN+A+GHYT G ELVD
Sbjct: 58 QGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDE 117
Query: 425 VLDVVRKEAEGCDCLQGFQLTHSLGGGTDLVWG 523
V D +R+ A+ C LQGF + HS GGGT +G
Sbjct: 118 VTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFG 150
Score = 75.8 bits (178), Expect = 7e-15
Identities = 39/108 (36%), Positives = 58/108 (53%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SG G LL+ ++ EY + FSV P+P+VS +VVEPYN+ L+ H ++ D T+ +DN
Sbjct: 147 SGFGALLLERLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHATLDLADCTFMVDN 206
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQLKRRFAE 834
E+ YDIC R + P+ L + + + F G L AE
Sbjct: 207 ESCYDICRRNLDIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAE 254
Score = 42.3 bits (95), Expect = 8e-05
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE--RINVYYNEASGGK 254
MREI+ I GQ G QIG WE+ EHGI G + ++ Q + +++E GK
Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 84.6 bits (200), Expect = 2e-17
Identities = 35/93 (37%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +2
Query: 257 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSE--AGNNWAKGHYTEGAELVDSVL 430
+PRA+++DLEP ++++ S +G ++ P+N + ++ AGNNWA G Y+ + + ++
Sbjct: 61 IPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIM 119
Query: 431 DVVRKEAEGCDCLQGFQLTHSLGGGTDLVWGIF 529
D++ +EA+G D L+GF L HS+ GGT G F
Sbjct: 120 DMIDREADGSDSLEGFSLLHSIAGGTGSGLGSF 152
Score = 65.3 bits (152), Expect = 1e-11
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVP-SPKVSDTVVEPYNATLSVHQLVENTDETYCID 687
SG+G+ L+ ++ + YP +I+ T+SV P S VSD VV+PYN+ L++ +L N D +D
Sbjct: 147 SGLGSFLLERLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLD 206
Query: 688 NEALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
N AL I Q PT V +PG +
Sbjct: 207 NAALAHIAADRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYM 249
Score = 53.6 bits (123), Expect = 3e-08
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +3
Query: 84 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEA 242
REI+ +QAGQCGNQIG++FW+ + EHGI G + ++R +V++ ++
Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQS 55
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 29.1 bits (62), Expect = 0.82
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 372 PASDCPKTKLSGRKICPNGPERTESMVPGSRS 277
P++ PK L R I PNGPE + + GS S
Sbjct: 20 PSTPPPKEVLHTRVIVPNGPEEIKLRLVGSHS 51
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 29.1 bits (62), Expect = 0.82
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = -3
Query: 506 YLLPENELAENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPSYSPPQ---TVRRRSCPV 336
YL P +A +P N L H P P PL N +SP Y P R + V
Sbjct: 30 YLTPSGTMAYHPG-NAPLFTQAPPHTNPQGPPPFPLFNSISPVYDPATGRLLYRNVNTQV 88
Query: 335 GRFA-QTARNGRSPWFQAQGPPSQL 264
A NG + + GPPSQL
Sbjct: 89 SHTAIPNPANGYAAVY--GGPPSQL 111
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 379 VIPRLRLSEDEVVRSEDLPKRPGT-DGVHGSRLKVHHHSSRDVLPPE 242
+IPRLR+ E E ++ K PG D S++++H ++ L E
Sbjct: 239 LIPRLRMQESEQFKNSKNMKSPGEGDLDSASQIELHDFKKKESLTAE 285
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 784 TPDIVAEQMVQVPIRLGFVSFKS*SRYRKAPHCLYNTSHQC 662
+P+ ++ VQV F F+ R+ K P+CL N H C
Sbjct: 101 SPEELSLDTVQVAAEDSFYEFQ---RFLKNPNCLRNHHHLC 138
>SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3
subunit Alp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 821
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -3
Query: 149 YFPELCSDLIPALTRLDVDDFPHDCTKNLEPPESN 45
+F E+ + P +LD+DD + + P E+N
Sbjct: 36 FFQEIIHSISPDTFQLDIDDILYKIYSKIPPEENN 70
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 26.2 bits (55), Expect = 5.8
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +2
Query: 326 QIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQLTHSLGGG 505
+++ D FG S G +G T G LV LD A + L F HS+GGG
Sbjct: 46 EVYTFDQRGFGHSRKGGPKKQG-CTGGWSLVFPDLDYQILRASDTE-LPLFLWGHSMGGG 103
Query: 506 TDLVWGI 526
L +GI
Sbjct: 104 LALRYGI 110
>SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 25.8 bits (54), Expect = 7.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 46 FDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPT 204
F S S S +STS RV++ ++ SSG + T+ + V +AT T
Sbjct: 165 FVSPSSSSSSSSSAATSTSTRVSSSAKASTSSGAIAYTTKCVVVPVTASATAT 217
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 383 AKGHYTEGAELVDSVLDVVRKEAEGCDCLQ 472
A+GH G ELV + D +RK++E L+
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALE 212
>SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 526
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 296 MDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTE 403
M ++R + P N++FG++E G G+ T+
Sbjct: 109 MSNIRKAQVKILKNPGNYIFGRTEYGKRTYSGNSTK 144
>SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 25.8 bits (54), Expect = 7.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 46 FDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPT 204
F S S S +STS RV++ ++ SSG + T+ + V +AT T
Sbjct: 165 FVSPSSSSSSSSSAATSTSTRVSSSAKASTSSGAIAYTTKCVVVPVTASATAT 217
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,806,804
Number of Sequences: 5004
Number of extensions: 84203
Number of successful extensions: 290
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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