Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0429.Seq
(844 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 173 9e-44
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 173 9e-44
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 173 9e-44
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 173 1e-43
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 172 3e-43
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 171 7e-43
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 170 9e-43
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 170 9e-43
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 169 2e-42
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 103 1e-22
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 103 1e-22
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 103 2e-22
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 103 2e-22
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 103 2e-22
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 103 2e-22
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 102 3e-22
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 77 1e-14
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 77 1e-14
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 33 0.31
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 1.3
At4g37190.1 68417.m05265 expressed protein 30 1.7
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 29 2.9
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 29 3.9
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 29 5.1
At3g09000.1 68416.m01053 proline-rich family protein 29 5.1
At2g40820.1 68415.m05038 proline-rich family protein contains pr... 28 6.8
At3g14540.1 68416.m01842 terpene synthase/cyclase family protein... 28 8.9
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 28 8.9
At3g01510.1 68416.m00077 5'-AMP-activated protein kinase beta-1 ... 28 8.9
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 28 8.9
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 173 bits (422), Expect = 9e-44
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQS AGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LDVVRKEAE CDCLQGFQ+ HSLGGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 136 bits (329), Expect = 2e-32
Identities = 69/102 (67%), Positives = 73/102 (71%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SGMG LLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EALYDICFRT TP+ L + FPGQL
Sbjct: 205 EALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246
Score = 106 bits (255), Expect = 2e-23
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGK 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID+TG Y G++DLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGR 58
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 173 bits (422), Expect = 9e-44
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQS AGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LDVVRKEAE CDCLQGFQ+ HSLGGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 136 bits (329), Expect = 2e-32
Identities = 69/102 (67%), Positives = 72/102 (70%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SGMG LLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EALYDICFRT PT L + FPGQL
Sbjct: 205 EALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQL 246
Score = 107 bits (258), Expect = 7e-24
Identities = 48/58 (82%), Positives = 51/58 (87%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGK 254
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQLERINVY+NEASGGK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGK 58
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 173 bits (422), Expect = 9e-44
Identities = 77/87 (88%), Positives = 83/87 (95%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQS AGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LDVVRKEAE CDCLQGFQ+ HSLGGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 137 bits (331), Expect = 1e-32
Identities = 69/102 (67%), Positives = 73/102 (71%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SGMG LLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EALYDICFRT TP+ L + FPGQL
Sbjct: 205 EALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQL 246
Score = 105 bits (251), Expect = 5e-23
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGK 254
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGR 58
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 173 bits (421), Expect = 1e-43
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQS AGNNWAKGHYTEGAEL+D+V
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LDVVRKEAE CDCLQGFQ+ HSLGGGT
Sbjct: 118 LDVVRKEAENCDCLQGFQVCHSLGGGT 144
Score = 137 bits (331), Expect = 1e-32
Identities = 69/102 (67%), Positives = 74/102 (72%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SGMG LLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN
Sbjct: 146 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 205
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EALYDICFRT TP+ L + + FPGQL
Sbjct: 206 EALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQL 247
Score = 111 bits (268), Expect = 4e-25
Identities = 50/59 (84%), Positives = 55/59 (93%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD-SDLQLERINVYYNEASGGK 254
MREI+HIQ GQCGNQIG+KFWEVI DEHGID+TG YSGD +DLQLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGR 59
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 172 bits (418), Expect = 3e-43
Identities = 75/87 (86%), Positives = 83/87 (95%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV++DLEPGTMDS+RSGP+GQIFRPDNFVFGQS AGNNWAKGHYTEGAEL+D+V
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LDVVRKEAE CDCLQGFQ+ HSLGGGT
Sbjct: 118 LDVVRKEAENCDCLQGFQVCHSLGGGT 144
Score = 137 bits (331), Expect = 1e-32
Identities = 69/102 (67%), Positives = 74/102 (72%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SGMG LLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN
Sbjct: 146 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 205
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EALYDICFRT TP+ L + + FPGQL
Sbjct: 206 EALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQL 247
Score = 110 bits (264), Expect = 1e-24
Identities = 48/59 (81%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLERINVYYNEASGGK 254
MREI+H+Q GQCGNQIG+KFWEVI DEHG+D TG Y+GDS DLQLERINVYYNEASGG+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGR 59
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 171 bits (415), Expect = 7e-43
Identities = 74/87 (85%), Positives = 83/87 (95%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRA+++DLEPGTMDSVR+GP+GQIFRPDNFVFGQS AGNNWAKGHYTEGAEL+D+V
Sbjct: 57 GRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LDVVRKEAE CDCLQGFQ+ HSLGGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 136 bits (329), Expect = 2e-32
Identities = 69/102 (67%), Positives = 73/102 (71%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SGMG LLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EALYDICFRT TP+ L + FPGQL
Sbjct: 205 EALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246
Score = 107 bits (258), Expect = 7e-24
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGK 254
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G+SDLQLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGR 58
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 170 bits (414), Expect = 9e-43
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQS AGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LDVVRKEAE CDCLQGFQ+ HSLGGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 136 bits (329), Expect = 2e-32
Identities = 69/102 (67%), Positives = 73/102 (71%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SGMG LLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EALYDICFRT TP+ L + FPGQL
Sbjct: 205 EALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246
Score = 109 bits (262), Expect = 2e-24
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGK 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGR 58
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 170 bits (414), Expect = 9e-43
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQS AGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LDVVRKEAE CDCLQGFQ+ HSLGGGT
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGGT 143
Score = 136 bits (329), Expect = 2e-32
Identities = 69/102 (67%), Positives = 73/102 (71%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SGMG LLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EALYDICFRT TP+ L + FPGQL
Sbjct: 205 EALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQL 246
Score = 109 bits (262), Expect = 2e-24
Identities = 48/58 (82%), Positives = 52/58 (89%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGK 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQLERINVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGR 58
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 169 bits (412), Expect = 2e-42
Identities = 76/87 (87%), Positives = 82/87 (94%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQS AGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LDVVRKEAE DCLQGFQ+ HSLGGGT
Sbjct: 117 LDVVRKEAENSDCLQGFQVCHSLGGGT 143
Score = 136 bits (329), Expect = 2e-32
Identities = 69/102 (67%), Positives = 72/102 (70%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SGMG LLISKIREEYPDR+M TFSV PSPKVSDTVVEPYNATLSVHQLVEN DE +DN
Sbjct: 145 SGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDN 204
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EALYDICFRT PT L + FPGQL
Sbjct: 205 EALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQL 246
Score = 109 bits (263), Expect = 2e-24
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGK 254
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI+VY+NEASGGK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGK 58
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 103 bits (248), Expect = 1e-22
Identities = 46/87 (52%), Positives = 63/87 (72%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV VDLEP +D VR+G + Q+F P+ + G+ +A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLC 118
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LD VRK A+ C LQGF + +++GGGT
Sbjct: 119 LDRVRKLADNCTGLQGFLVFNAVGGGT 145
Score = 82.6 bits (195), Expect = 3e-16
Identities = 37/87 (42%), Positives = 56/87 (64%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SG+G+LL+ ++ +Y + F++ PSP+VS VVEPYN+ LS H L+E+TD +DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDN 206
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQR 771
EA+YDIC R+ + PT L + +
Sbjct: 207 EAIYDICRRSLDIERPTYTNLNRLISQ 233
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 254
MREI+ I GQ G Q+G WE+ EHGI G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 103 bits (248), Expect = 1e-22
Identities = 46/87 (52%), Positives = 63/87 (72%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV VDLEP +D VR+G + Q+F P+ + G+ +A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLC 118
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LD VRK A+ C LQGF + +++GGGT
Sbjct: 119 LDRVRKLADNCTGLQGFLVFNAVGGGT 145
Score = 82.6 bits (195), Expect = 3e-16
Identities = 37/87 (42%), Positives = 56/87 (64%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SG+G+LL+ ++ +Y + F++ PSP+VS VVEPYN+ LS H L+E+TD +DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDN 206
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQR 771
EA+YDIC R+ + PT L + +
Sbjct: 207 EAIYDICRRSLDIERPTYTNLNRLISQ 233
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 254
MREI+ I GQ G Q+G WE+ EHGI G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 103 bits (246), Expect = 2e-22
Identities = 45/87 (51%), Positives = 63/87 (72%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV VDLEP +D VR+G + Q+F P+ + G+ +A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LD +RK A+ C LQGF + +++GGGT
Sbjct: 119 LDRIRKLADNCTGLQGFLVFNAVGGGT 145
Score = 85.4 bits (202), Expect = 4e-17
Identities = 42/102 (41%), Positives = 63/102 (61%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SG+G+LL+ ++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD + +DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EA+YDIC R+ + + PT L V + + F G L
Sbjct: 207 EAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGAL 248
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 254
MRE + I GQ G Q+G WE+ EHGI G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 103 bits (246), Expect = 2e-22
Identities = 45/87 (51%), Positives = 63/87 (72%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV VDLEP +D VR+G + Q+F P+ + G+ +A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LD +RK A+ C LQGF + +++GGGT
Sbjct: 119 LDRIRKLADNCTGLQGFLVFNAVGGGT 145
Score = 85.4 bits (202), Expect = 4e-17
Identities = 42/102 (41%), Positives = 63/102 (61%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SG+G+LL+ ++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD + +DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EA+YDIC R+ + + PT L V + + F G L
Sbjct: 207 EAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGAL 248
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 254
MRE + I GQ G Q+G WE+ EHGI G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 103 bits (246), Expect = 2e-22
Identities = 45/87 (51%), Positives = 63/87 (72%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV VDLEP +D VR+G + Q+F P+ + G+ +A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LD +RK A+ C LQGF + +++GGGT
Sbjct: 119 LDRIRKLADNCTGLQGFLVFNAVGGGT 145
Score = 86.6 bits (205), Expect = 2e-17
Identities = 43/102 (42%), Positives = 63/102 (61%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SG+G+LL+ ++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD + +DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EA+YDIC R+ S + PT L V + + F G L
Sbjct: 207 EAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGAL 248
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 254
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 103 bits (246), Expect = 2e-22
Identities = 45/87 (51%), Positives = 63/87 (72%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
G+ VPRAV VDLEP +D VR+G + Q+F P+ + G+ +A NN+A+GHYT G E+VD
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
LD +RK A+ C LQGF + +++GGGT
Sbjct: 119 LDRIRKLADNCTGLQGFLVFNAVGGGT 145
Score = 86.6 bits (205), Expect = 2e-17
Identities = 43/102 (42%), Positives = 63/102 (61%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SG+G+LL+ ++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD + +DN
Sbjct: 147 SGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDN 206
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EA+YDIC R+ S + PT L V + + F G L
Sbjct: 207 EAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGAL 248
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 254
MRE + I GQ G Q+G WE+ EHGI G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 102 bits (245), Expect = 3e-22
Identities = 44/87 (50%), Positives = 64/87 (73%)
Frame = +2
Query: 248 GQDVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSEAGNNWAKGHYTEGAELVDSV 427
GQ VPRAV +DLEP +D VR+G + Q+F P+ + G+ +A NN+A+GHYT G E+VD+
Sbjct: 59 GQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTC 118
Query: 428 LDVVRKEAEGCDCLQGFQLTHSLGGGT 508
L+ +RK A+ C LQGF + +++GGGT
Sbjct: 119 LERLRKLADNCTGLQGFLVFNAVGGGT 145
Score = 81.0 bits (191), Expect = 9e-16
Identities = 38/102 (37%), Positives = 60/102 (58%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 690
SG+G+LL+ ++ ++ + F++ PSP+VS VVEPYN+ LS H L+E+TD +DN
Sbjct: 147 SGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDN 206
Query: 691 EALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
EA+YDIC R+ + PT L + + + F G +
Sbjct: 207 EAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAI 248
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL--ERINVYYNEASGGK 254
MREI+ I GQ G Q+G WE+ EHGI G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SEAGNNWAKGHYTEGAELVDSVL 430
+PRA+++DLEP ++ +++G + ++ +N AGNNWA G Y +G + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIM 119
Query: 431 DVVRKEAEGCDCLQGFQLTHSLGGGT 508
D++ +EA+G D L+GF L HS+ GGT
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGT 145
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCID 687
SGMG+ L+ + + Y +++ T+SV P+ + SD VV+PYN+ L++ +L N D +D
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 206
Query: 688 NEALYDICFRT*S*QTPTVWGLEPFVQRQCLV*PRAFEFPGQL 816
N AL I PT V +PG +
Sbjct: 207 NTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYM 249
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3
Query: 84 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEA 242
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQA 55
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SEAGNNWAKGHYTEGAELVDSVL 430
+PRA+++DLEP ++ +++G + ++ +N AGNNWA G Y +G + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIM 119
Query: 431 DVVRKEAEGCDCLQGFQLTHSLGGGT 508
D++ +EA+G D L+GF L HS+ GGT
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGT 145
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 511 SGMGNLLISKIREEYPDRIMNTFSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCID 687
SGMG+ L+ + + Y +++ T+SV P+ + SD VV+PYN+ L++ +L N D +D
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 206
Query: 688 NEAL 699
N AL
Sbjct: 207 NTAL 210
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3
Query: 84 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEA 242
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQA 55
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 32.7 bits (71), Expect = 0.31
Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 382 PVIPRLRLSEDEVVRSEDLPKRPGTDGVHGSRLKVHHHSS-RDVLPPEASL**TLMRSSC 206
P+ P+ L D R E P R + SRL H S RD PP S L RSS
Sbjct: 584 PLYPKASLKRDYDRRDELPPPRSRPAVSYSSRLSPERHLSYRDDYPPRGSGYSDLPRSSS 643
Query: 205 RSE 197
RSE
Sbjct: 644 RSE 646
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2
Query: 413 LVDSVLDVVRKEAEGCDCLQGFQLTHS 493
+++SV VVRKEAE C+CLQ F ++ S
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVSGS 26
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 81 MREIVHIQAGQCGNQIGAKFW 143
MREIV IQ G+ N +G+ FW
Sbjct: 1 MREIVTIQVGEFANFVGSHFW 21
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 143 PELCSDLIPALTRLDVDDFPHDCTKNLEPP 54
P+L S ++ ++ LD+ D P DC L PP
Sbjct: 50 PDLASPVLGKMSILDLPDLPLDCILELLPP 79
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -3
Query: 428 VPNQPVQPPLCNVL-SPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQLAGRL 252
+P PP N SP+Y PP + P F T + P PP LAG L
Sbjct: 84 IPGSRPPPPSSNSFPSPAYGPPGGAPFQRFPSPPFPTTQNPPQGP-----PPPQTLAGHL 138
Query: 251 AP 246
+P
Sbjct: 139 SP 140
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -3
Query: 530 KRFPIPDQYLLPENELAENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPSYSPPQT 360
+RF + +LL N DNR LL + P P PP+ P PPQ+
Sbjct: 4 QRFSLTLVFLLAILITVANGNDNRKLLTSYKYSPPPPPVYSPPISPPPPPPPPPPQS 60
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +1
Query: 88 KSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGARRPAS 267
K TS AG+R SSG TS TP + TPT S + ++T + P S
Sbjct: 133 KPQTSSSSVAGLRRPSSSGSSRSTSRPATP-TRRSTTPTTSTSRPVTTRASNSRSSTPTS 191
>At2g40820.1 68415.m05038 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 903
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/88 (26%), Positives = 37/88 (42%)
Frame = -3
Query: 524 FPIPDQYLLPENELAENPADNRSLLLLF*LHPVPNQPVQPPLCNVLSPSYSPPQTVRRRS 345
F +P Y + + P N + + +P P QP PP+ + P+Y P++V S
Sbjct: 731 FSVPPSYN-HHSSMPNPPMTNTNPQMQQPYYPPPMQPPPPPMNSGYMPTYI-PKSVNDSS 788
Query: 344 CPVGRFAQTARNGRSPWFQAQGPPSQLA 261
P T + P++ PP Q A
Sbjct: 789 MPNPPMNNTNPQMQQPYYP---PPMQPA 813
>At3g14540.1 68416.m01842 terpene synthase/cyclase family protein
similar to terpene synthase GB:CAA72074 from
[Arabidopsis thaliana]
Length = 602
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 695 RFTISASGLEANKPQPYGDLNHLFSDNVWCDHVLSNSQDN 814
R T S+ LE ++P Y FS ++W DH LS S D+
Sbjct: 48 RSTKSSDDLETSRPSTY------FSPSLWGDHFLSVSLDH 81
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 87 EIVHIQAGQCGNQIGAKFWEVISD 158
+I++ A + G+ GA FWEVIS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At3g01510.1 68416.m00077 5'-AMP-activated protein kinase beta-1
subunit-related contains similarity to Swiss-Prot:P80387
5'-AMP-activated protein kinase, beta-1 subunit (AMPK
beta-1 chain) (AMPKb) (40 kDa subunit) [Sus scrofa]
Length = 591
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -3
Query: 614 TVSETFGLGTTENVFIIRSGYSSRILEIKRFPIPDQYLLPENEL 483
T+ E G T+ + + ++G S +LE P P QYLL ++L
Sbjct: 130 TLVEIKDFGDTKKMLVEKTGSFSLVLERPFSPFPIQYLLHLSDL 173
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta repeat;
similar to Coatomer alpha subunit (Alpha-coat protein)
(Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens]
Length = 1216
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 525 SFDFQNP*RVSRSYYEYVFRGTKSKGFRYC 614
++DF+NP V S Y ++RG K YC
Sbjct: 1151 NYDFRNPFVVCGSTYVPIYRGQKDVSCPYC 1180
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,376,706
Number of Sequences: 28952
Number of extensions: 464852
Number of successful extensions: 1602
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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