Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0426.Seq
         (797 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3LW64 Cluster: Regulator of transcription that contain...    34   4.8  
UniRef50_A7TK94 Cluster: Putative uncharacterized protein; n=1; ...    34   4.8  
UniRef50_Q1DSZ1 Cluster: Predicted protein; n=1; Coccidioides im...    33   6.3  

>UniRef50_Q3LW64 Cluster: Regulator of transcription that contains
           myb domains; n=1; Bigelowiella natans|Rep: Regulator of
           transcription that contains myb domains - Bigelowiella
           natans (Pedinomonas minutissima) (Chlorarachnion
           sp.(strain CCMP 621))
          Length = 636

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -3

Query: 219 LNFIIVQSFFGIFTRSGKKLTLIALFSIIDDVLEFNCLSIN 97
           LNFII +  F I  +    +++I+L  II + + ++C  IN
Sbjct: 580 LNFIIKKLLFNILNKCRTNISIISLEQIISETMNYSCYKIN 620


>UniRef50_A7TK94 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 636

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
 Frame = +1

Query: 643 SLRQIASNRDRVGKIFDTIRKT-SLQPILSSKALEWGSLSLTA 768
           SL +   ++ ++ KIF+ I+KT +L PI S+K++E G L+ TA
Sbjct: 299 SLEESRLSKQKLDKIFNQIKKTRNLTPIDSTKSMEGGVLAATA 341


>UniRef50_Q1DSZ1 Cluster: Predicted protein; n=1; Coccidioides
           immitis|Rep: Predicted protein - Coccidioides immitis
          Length = 115

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 19/83 (22%), Positives = 38/83 (45%)
 Frame = -1

Query: 614 SEAVVKISKSESAERYGYNHRESDAPPHEEPDGVG*AVEGLAEAVIDSRVNADSADIRRT 435
           S+ + K++ +E   R   +    +   +      G  V G  E ++ +  NA++A I+  
Sbjct: 20  SKVIQKVANAERGTRIFLSRTPKNDEKYNLRFDKGSVVGGEHELILQANKNAENASIKAA 79

Query: 434 GLFLSHRILRSLLIDMKEEKQKK 366
               SH+I   +L+D +   +KK
Sbjct: 80  AAADSHKIWAKILVDPENADEKK 102


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,294,512
Number of Sequences: 1657284
Number of extensions: 12169737
Number of successful extensions: 31368
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31362
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)