Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0426.Seq
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guany...    28   6.7  

>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 383 EEKQKKRNSLSSTWSDNVIQKDFYVPGEVKFSA 285
           EE  +   SLS+ W D++  K F V G+++F A
Sbjct: 278 EEYAEFYKSLSNDWEDHLAVKHFSVEGQLEFRA 310


>Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical protein
            F57F5.2 protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = -1

Query: 557  HRESDAPPHEEPDGVG*AVEGLAEAVIDSRVNADSADIRRTGLFLSHRILRSLLIDMKEE 378
            H +  + P   P  +G A+        DS  +  S D  RT +       R LL     E
Sbjct: 833  HEDRTSLPSATPSEIGDAISKKKLEKEDSNSSMSSLD-ERTTVSAKPTTTRRLLNQKDLE 891

Query: 377  KQKKRNSLSST 345
            K+KKR+S++ +
Sbjct: 892  KEKKRSSMAGS 902


>Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical protein
            F57F5.2 protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = -1

Query: 557  HRESDAPPHEEPDGVG*AVEGLAEAVIDSRVNADSADIRRTGLFLSHRILRSLLIDMKEE 378
            H +  + P   P  +G A+        DS  +  S D  RT +       R LL     E
Sbjct: 833  HEDRTSLPSATPSEIGDAISKKKLEKEDSNSSMSSLD-ERTTVSAKPTTTRRLLNQKDLE 891

Query: 377  KQKKRNSLSST 345
            K+KKR+S++ +
Sbjct: 892  KEKKRSSMAGS 902


>AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guanylyl
            cyclase GCY-33 protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = -1

Query: 557  HRESDAPPHEEPDGVG*AVEGLAEAVIDSRVNADSADIRRTGLFLSHRILRSLLIDMKEE 378
            H +  + P   P  +G A+        DS  +  S D  RT +       R LL     E
Sbjct: 833  HEDRTSLPSATPSEIGDAISKKKLEKEDSNSSMSSLD-ERTTVSAKPTTTRRLLNQKDLE 891

Query: 377  KQKKRNSLSST 345
            K+KKR+S++ +
Sbjct: 892  KEKKRSSMAGS 902


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,734,923
Number of Sequences: 27780
Number of extensions: 302383
Number of successful extensions: 831
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)