Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0426.Seq
         (797 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea...    29   3.6  
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl...    29   4.7  
At5g56010.1 68418.m06989 heat shock protein, putative strong sim...    29   4.7  
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl...    29   4.7  
At2g45900.1 68415.m05708 expressed protein                             28   6.2  
At1g51800.1 68414.m05837 leucine-rich repeat protein kinase, put...    28   8.3  

>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
           shock protein 83 (HSP83) nearly identical to SP|P27323
           Heat shock protein 81-1 (HSP81-1) (Heat shock protein
           83) {Arabidopsis thaliana}; contains Pfam profiles
           PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
           HSP90-like domain protein, PF00183: Hsp90 protein
          Length = 705

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 386 KEEKQKKRNSLSSTWSDNVIQKDFYVPGEVKFSA 285
           KEE      SL++ W D++  K F V G+++F A
Sbjct: 283 KEEYAAFYKSLTNDWEDHLAVKHFSVEGQLEFKA 316


>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
           identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
           {Arabidopsis thaliana}
          Length = 699

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 386 KEEKQKKRNSLSSTWSDNVIQKDFYVPGEVKFSA 285
           KEE      SLS+ W +++  K F V G+++F A
Sbjct: 277 KEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFKA 310


>At5g56010.1 68418.m06989 heat shock protein, putative strong
           similarity to SP|P55737 Heat shock protein 81-2
           (HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
           PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
           HSP90-like domain protein, PF00183: Hsp90 protein
          Length = 699

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 386 KEEKQKKRNSLSSTWSDNVIQKDFYVPGEVKFSA 285
           KEE      SLS+ W +++  K F V G+++F A
Sbjct: 277 KEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFKA 310


>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
           identical to heat shock protein hsp81.4 [Arabidopsis
           thaliana] GI:1906828; contains Pfam profiles PF02518:
           ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
           domain protein, PF00183: Hsp90 protein
          Length = 699

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 386 KEEKQKKRNSLSSTWSDNVIQKDFYVPGEVKFSA 285
           KEE      SLS+ W +++  K F V G+++F A
Sbjct: 277 KEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFKA 310


>At2g45900.1 68415.m05708 expressed protein
          Length = 720

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 389 MKEEKQKKRNSLSSTWSDNVIQKDFYV 309
           M+EE+Q   +SLS   S ++IQ+D Y+
Sbjct: 426 MEEEEQTVMDSLSEAISSSIIQQDAYI 452


>At1g51800.1 68414.m05837 leucine-rich repeat protein kinase,
           putative similar to light repressible receptor protein
           kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
           contains leucine rich repeat (LRR) domains,
           Pfam:PF00560; contains protein kinase domain,
           Pfam:PF00069
          Length = 894

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 708 VTSANFVIEGTGVGKSILNGFHFRFQQ 788
           ++ ANF+   TGVG SI  G+  +FQQ
Sbjct: 52  ISDANFI--NTGVGGSIKQGYRTQFQQ 76


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,674,769
Number of Sequences: 28952
Number of extensions: 275521
Number of successful extensions: 653
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)