Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0423.Seq
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0560 - 4413174-4414469 33 0.22
10_08_0334 + 16859581-16859701,16859729-16860003,16862355-16863839 31 0.88
06_01_1137 + 9412230-9412378,9412549-9412634,9413417-9413496,941... 29 2.7
01_05_0742 - 24829151-24829307,24829894-24830136,24830175-24830251 29 2.7
02_03_0120 + 15463163-15465250 29 3.5
02_01_0302 - 2021221-2023305 29 3.5
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 29 4.7
07_01_0795 - 6257985-6258149,6258276-6258380,6259196-6259328,626... 29 4.7
09_04_0296 + 16461482-16461544,16462087-16463097 28 6.2
01_06_1486 - 37709159-37709377,37709558-37709821,37709903-377099... 28 6.2
01_01_0121 - 1136241-1136624 28 6.2
11_04_0001 + 11984639-11984875,11984989-11985278,11985361-119857... 28 8.2
09_04_0078 + 14379720-14379786,14379903-14379974,14381093-143814... 28 8.2
06_01_0542 + 3877863-3878017,3878106-3878169,3878259-3878308,387... 28 8.2
06_01_0532 + 3839807-3839961,3840050-3840113,3840203-3840252,384... 28 8.2
01_01_1039 - 8200922-8201553,8201652-8201784 28 8.2
>11_01_0560 - 4413174-4414469
Length = 431
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/59 (37%), Positives = 26/59 (44%)
Frame = -2
Query: 586 GEXVAGGAXCMWRPPNQEQDVPGPHAAGAVXDVSATPGHVPRRAVPLLPTVRLKVLQVE 410
G VAGG P +Q VP P A GA ++ PG P + LP VR L E
Sbjct: 143 GAHVAGGVGAPGAFPESKQLVPWPCAVGA---GASAPGAAPDNRLLALPDVRFDALTAE 198
>10_08_0334 + 16859581-16859701,16859729-16860003,16862355-16863839
Length = 626
Score = 31.1 bits (67), Expect = 0.88
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = -2
Query: 430 LKVLQVERISVVDQQRLPGPRRH----VNSRRLHRIYLELPGFVFGGVVRSWMVMGAAEV 263
L+++ + SVV+ QRL RRH + I++ LP FV GV +++V+G E
Sbjct: 448 LQIVTMVVTSVVESQRLGYARRHGLVATGGQLPVTIFILLPQFVLLGVADAFLVVGQIEF 507
Query: 262 Y 260
+
Sbjct: 508 F 508
>06_01_1137 +
9412230-9412378,9412549-9412634,9413417-9413496,
9413826-9413881,9414038-9414086,9414692-9414841,
9414993-9415088,9415442-9415555,9415655-9415785,
9416171-9416408,9416603-9416656,9417100-9417117,
9417906-9418722,9418797-9418846
Length = 695
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 547 PPNQEQDVPGPHAAGAVXDVSATPGH 470
PP +Q P P A A+ + SA PGH
Sbjct: 7 PPPSQQQQPRPRAPYAIPEWSAAPGH 32
>01_05_0742 - 24829151-24829307,24829894-24830136,24830175-24830251
Length = 158
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 429 RRTVGSSGTARL-GTWPGVALTSITAPAAWG-PGTSCSWFGGRHIHXAPPATXSPPDGKY 602
RR G+ GT L T P + + A A+W T W APP++ +PP
Sbjct: 26 RREKGARGTPTLENTVPTPSSRKLEASASWANQSTPPRWLSSAS---APPSSWAPPPPPE 82
Query: 603 VRREGY 620
+ + GY
Sbjct: 83 LAKSGY 88
>02_03_0120 + 15463163-15465250
Length = 695
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 379 PGPRRHVNSRRLHRIYLELPGFVFGGVVRSWMVMGAA 269
P P H N RR H Y L G + G V+ +V+G+A
Sbjct: 315 PPPPPHPNHRRRHLFYKVLGGVLGGMVLLGLVVVGSA 351
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 473 PCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAPP 342
P P +S+TT S +P G SS T P+ + P+PP
Sbjct: 445 PSPPSSATTPSSHSPPGGSSST-TPSYPSPNGGKPSTPSHPSPP 487
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 506 GSGDXRQRDTRPCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQP 351
G+GD RD P T+S+++S + ++S T + T+ + A P
Sbjct: 27 GAGDGHHRDFSSPPSTTSSSSSSSSSSSTNSPTATAASSSSTNTSGAAIVHP 78
>07_01_0795 -
6257985-6258149,6258276-6258380,6259196-6259328,
6260225-6260289,6260569-6261642,6262328-6262433,
6262872-6263044,6263352-6263765
Length = 744
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -1
Query: 473 PCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAPP 342
P P S D A S +RT + R P + R A APP
Sbjct: 5 PPPPRSPAATPDAAAPASPARTRVVRAPPRPPRPRLAHPGAAPP 48
>09_04_0296 + 16461482-16461544,16462087-16463097
Length = 357
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 547 PPNQEQDVPGPHAAGAVXDVSATPGHVPRRAVPLLPTVRLK 425
PP Q +DV AA A ++ P +++ P P RL+
Sbjct: 165 PPQQPEDVDAAAAAAAAAPPNSKPKKKKKKSRPCFPGARLR 205
>01_06_1486 -
37709159-37709377,37709558-37709821,37709903-37709995,
37710387-37710581,37710665-37710763,37710884-37711132,
37711264-37711467,37711543-37711602,37711731-37711913,
37712382-37712999,37713101-37713169,37713275-37713853
Length = 943
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 550 RPPNQEQDVPGPHAAGAVXDVSATPGHVPRRA-VPLLPTVRLKVLQVERISVVDQQRLPG 374
RPP +Q P AA A S TP P+ A V + V+R ++D++R
Sbjct: 115 RPPRSQQQTPTTTAAAAADSRSPTPAAPPQTASVSQREEEKSLASVVKRPMLLDERRSLS 174
Query: 373 P 371
P
Sbjct: 175 P 175
>01_01_0121 - 1136241-1136624
Length = 127
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 586 GEXVAGGAXCMWRPPNQEQDVPGPHAAGAVXD-VSATPG-HVPRRAVPLLPTVRLKVLQV 413
GE +GGA C WR PN+ G + D + G V + P LP++ + ++
Sbjct: 33 GEAGSGGAPCGWRRPNRAATPGGGNGGTPASDWMGKQKGMGVLGTSNPFLPSISEDLQRM 92
Query: 412 ERI 404
RI
Sbjct: 93 RRI 95
>11_04_0001 +
11984639-11984875,11984989-11985278,11985361-11985719,
11985797-11985984,11986058-11986247,11986497-11986631,
11986694-11986947
Length = 550
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 595 PSGGEXVAGGAXCMWRPPNQEQDVPGPHAAGAVXDVSATPGHVPRR 458
P+G + GA PP + Q GP + + +V A G PR+
Sbjct: 226 PTGSQSAEAGAEVNQEPPTRNQSDTGP--SQEIAEVEAQAGSPPRK 269
>09_04_0078 +
14379720-14379786,14379903-14379974,14381093-14381497,
14382835-14382911,14383016-14383135,14383227-14383997,
14384933-14385146,14385269-14385735
Length = 730
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/57 (24%), Positives = 22/57 (38%)
Frame = +2
Query: 269 RGSHNHPATYNPSKHESRKFQVDPMEAPAVYVPSRSGKSLLVHDGYTFYLKNLQAHG 439
RG H+H NP+ + Q + A S L++ YL+ +HG
Sbjct: 401 RGHHHHRTMENPTASDETNVQATTINVLARNAAPTESASALINSALEKYLEQYFSHG 457
>06_01_0542 +
3877863-3878017,3878106-3878169,3878259-3878308,
3878393-3878583,3878767-3878827,3878959-3879031,
3879364-3879487,3879568-3879644,3880064-3880140,
3880748-3880819,3881313-3881425,3881518-3881522,
3881950-3882069
Length = 393
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 315 SCLEGLYVAGWLWEPRKYTRHRLSNIRQLDSVQL 214
SCL LYVAG LW+ + TR LS + + S L
Sbjct: 42 SCLAWLYVAGRLWQDAQ-TRMILSGLLEKSSGNL 74
>06_01_0532 +
3839807-3839961,3840050-3840113,3840203-3840252,
3840337-3840527,3840711-3840771,3840903-3840975,
3841308-3841431,3841512-3841588,3842008-3842084,
3842692-3842763,3843257-3843369,3843462-3843466,
3843894-3844013
Length = 393
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 315 SCLEGLYVAGWLWEPRKYTRHRLSNIRQLDSVQL 214
SCL LYVAG LW+ + TR LS + + S L
Sbjct: 42 SCLAWLYVAGRLWQDAQ-TRMILSGLLEKSSGNL 74
>01_01_1039 - 8200922-8201553,8201652-8201784
Length = 254
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 127 CRPPRADLM*NQPLWRFSSIYTTGL 53
C PPR +QP W ++Y++G+
Sbjct: 120 CNPPRRHFDMSQPAWEAIAVYSSGI 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,712,423
Number of Sequences: 37544
Number of extensions: 566004
Number of successful extensions: 1735
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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