Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0423.Seq
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associat... 33 0.98
AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein. 33 0.98
AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA s... 33 0.98
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 33 1.3
BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein. 33 1.3
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 1.3
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 33 1.3
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 33 1.3
AB015644-1|BAA34957.1| 229|Homo sapiens RNA binding protein pro... 33 1.3
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 1.3
X74794-1|CAA52801.1| 923|Homo sapiens P1 Cdc21 protein protein. 32 1.7
BC028572-1|AAH28572.1| 716|Homo sapiens FLYWCH-type zinc finger... 30 6.9
BC018712-1|AAH18712.1| 391|Homo sapiens FLYWCH1 protein protein. 30 6.9
BC001973-1|AAH01973.1| 466|Homo sapiens FLYWCH1 protein protein. 30 6.9
AK127235-1|BAC86896.1| 328|Homo sapiens protein ( Homo sapiens ... 30 6.9
AB046772-1|BAB13378.1| 726|Homo sapiens KIAA1552 protein protein. 30 6.9
X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated chond... 30 9.1
AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin su... 30 9.1
>BC053992-1|AAH53992.1| 1312|Homo sapiens SR-related CTD-associated
factor 1 protein.
Length = 1312
Score = 33.1 bits (72), Expect = 0.98
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -1
Query: 491 RQRDTRPCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAPP 342
RQR P P + A+ S R R G K + +S++ QPAPP
Sbjct: 495 RQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPP 544
>AK024444-1|BAB15734.1| 1343|Homo sapiens FLJ00034 protein protein.
Length = 1343
Score = 33.1 bits (72), Expect = 0.98
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -1
Query: 491 RQRDTRPCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAPP 342
RQR P P + A+ S R R G K + +S++ QPAPP
Sbjct: 526 RQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPP 575
>AF254411-1|AAF87552.1| 1312|Homo sapiens ser/arg-rich pre-mRNA
splicing factor SR-A1 protein.
Length = 1312
Score = 33.1 bits (72), Expect = 0.98
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -1
Query: 491 RQRDTRPCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAPP 342
RQR P P + A+ S R R G K + +S++ QPAPP
Sbjct: 495 RQRSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQPAPP 544
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 491 RQRDTRPCPET---SSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
R R T P P++ +T++D A +SR+ R KT T+ A + P+P
Sbjct: 247 RSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSP 298
>BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein.
Length = 311
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 491 RQRDTRPCPET---SSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
R R T P P++ +T++D A +SR+ R KT T+ A + P+P
Sbjct: 151 RSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSP 202
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 491 RQRDTRPCPET---SSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
R R T P P++ +T++D A +SR+ R KT T+ A + P+P
Sbjct: 247 RSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSP 298
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 491 RQRDTRPCPET---SSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
R R T P P++ +T++D A +SR+ R KT T+ A + P+P
Sbjct: 212 RSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSP 263
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 491 RQRDTRPCPET---SSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
R R T P P++ +T++D A +SR+ R KT T+ A + P+P
Sbjct: 37 RSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSP 88
>AB015644-1|BAA34957.1| 229|Homo sapiens RNA binding protein
protein.
Length = 229
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 491 RQRDTRPCPET---SSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
R R T P P++ +T++D A +SR+ R KT T+ A + P+P
Sbjct: 51 RSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSP 102
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 491 RQRDTRPCPET---SSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
R R T P P++ +T++D A +SR+ R KT T+ A + P+P
Sbjct: 295 RSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSP 346
>X74794-1|CAA52801.1| 923|Homo sapiens P1 Cdc21 protein protein.
Length = 923
Score = 32.3 bits (70), Expect = 1.7
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 506 GSGDXRQRDTRPCPETSSTTASDRAPEGSSSRTYIRRG---PTKTSRTSTARKQPA 348
G G R CP + T ++ +P + SR RRG P +T R+ AR P+
Sbjct: 39 GQGSREAGPARACPCRAGTPSTMSSPASTPSRRGSRRGRATPAQTPRSEDARSSPS 94
>BC028572-1|AAH28572.1| 716|Homo sapiens FLYWCH-type zinc finger 1
protein.
Length = 716
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 335 DPMEAPAVYVPSRSGKSLLVHDGYTFYLKNLQAHGRKQWYCSSRDMAGCRADVXHRSRSV 514
DP+ P ++ + G LVH+ + Y K A + W C + GC RSR++
Sbjct: 593 DPLR-PLEFLRTSLGGRFLVHESF-LYRKEKAAGEKVYWMCRDQARLGC------RSRAI 644
Query: 515 GAGDILFLVRGPPH 556
G + ++R H
Sbjct: 645 TQGHRIMVMRSHCH 658
>BC018712-1|AAH18712.1| 391|Homo sapiens FLYWCH1 protein protein.
Length = 391
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 335 DPMEAPAVYVPSRSGKSLLVHDGYTFYLKNLQAHGRKQWYCSSRDMAGCRADVXHRSRSV 514
DP+ P ++ + G LVH+ + Y K A + W C + GC RSR++
Sbjct: 268 DPLR-PLEFLRTSLGGRFLVHESF-LYRKEKAAGEKVYWMCRDQARLGC------RSRAI 319
Query: 515 GAGDILFLVRGPPH 556
G + ++R H
Sbjct: 320 TQGHRIMVMRSHCH 333
>BC001973-1|AAH01973.1| 466|Homo sapiens FLYWCH1 protein protein.
Length = 466
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 335 DPMEAPAVYVPSRSGKSLLVHDGYTFYLKNLQAHGRKQWYCSSRDMAGCRADVXHRSRSV 514
DP+ P ++ + G LVH+ + Y K A + W C + GC RSR++
Sbjct: 355 DPLR-PLEFLRTSLGGRFLVHESF-LYRKEKAAGEKVYWMCRDQARLGC------RSRAI 406
Query: 515 GAGDILFLVRGPPH 556
G + ++R H
Sbjct: 407 TQGHRIMVMRSHCH 420
>AK127235-1|BAC86896.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ45302 fis, clone BRHIP3003845. ).
Length = 328
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 335 DPMEAPAVYVPSRSGKSLLVHDGYTFYLKNLQAHGRKQWYCSSRDMAGCRADVXHRSRSV 514
DP+ P ++ + G LVH+ + Y K A + W C + GC RSR++
Sbjct: 205 DPLR-PLEFLRTSLGGRFLVHESF-LYRKEKAAGEKVYWMCRDQARLGC------RSRAI 256
Query: 515 GAGDILFLVRGPPH 556
G + ++R H
Sbjct: 257 TQGHRIMVMRSHCH 270
>AB046772-1|BAB13378.1| 726|Homo sapiens KIAA1552 protein protein.
Length = 726
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 335 DPMEAPAVYVPSRSGKSLLVHDGYTFYLKNLQAHGRKQWYCSSRDMAGCRADVXHRSRSV 514
DP+ P ++ + G LVH+ + Y K A + W C + GC RSR++
Sbjct: 603 DPLR-PLEFLRTSLGGRFLVHESF-LYRKEKAAGEKVYWMCRDQARLGC------RSRAI 654
Query: 515 GAGDILFLVRGPPH 556
G + ++R H
Sbjct: 655 TQGHRIMVMRSHCH 668
>X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated
chondroitin sulfate proteoglycan (MCSP) protein.
Length = 2322
Score = 29.9 bits (64), Expect = 9.1
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = -2
Query: 526 VPGPHAAGA----VXDVSATPGHVPRRAVPLLPTVRLKV-LQVERISVVDQQRLPGPRRH 362
V GP + A V DV+ P P+ +VPL T + + ++SVVD PG +
Sbjct: 1812 VAGPQTSEAFAITVRDVNERPPQ-PQASVPLRLTRGSRAPISRAQLSVVDPDSAPGEIEY 1870
Query: 361 VNSRRLHRIYLELPGFVFGGVVR 293
R H +L L G G V R
Sbjct: 1871 EVQRAPHNGFLSLVGGGLGPVTR 1893
>AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin sulfate
proteoglycan protein.
Length = 2322
Score = 29.9 bits (64), Expect = 9.1
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = -2
Query: 526 VPGPHAAGA----VXDVSATPGHVPRRAVPLLPTVRLKV-LQVERISVVDQQRLPGPRRH 362
V GP + A V DV+ P P+ +VPL T + + ++SVVD PG +
Sbjct: 1812 VAGPQTSEAFAITVRDVNERPPQ-PQASVPLRLTRGSRAPISRAQLSVVDPDSAPGEIEY 1870
Query: 361 VNSRRLHRIYLELPGFVFGGVVR 293
R H +L L G G V R
Sbjct: 1871 EVQRAPHNGFLSLVGGGLGPVTR 1893
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,895,234
Number of Sequences: 237096
Number of extensions: 2969720
Number of successful extensions: 8115
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8092
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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