Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0423.Seq
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p... 31 1.0
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p... 31 1.0
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr... 31 1.0
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 31 1.0
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 30 1.4
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 30 1.4
AL032626-21|CAD45606.2| 433|Caenorhabditis elegans Hypothetical... 30 1.4
AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical... 30 1.4
AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical... 30 1.4
AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid... 30 1.4
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 29 4.2
AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transpor... 29 4.2
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 27 9.8
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 9.8
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL110484-18|CAB54409.1| 357|Caenorhabditis elegans Hypothetical... 27 9.8
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1
Query: 506 GSGDXRQRDTRPCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
G+ R+ T P P T++TT + P +++ T PT T + +T PAP
Sbjct: 406 GNSVKREVPTTPLPTTTTTTTTTPKPTTTTTTT-TTPAPTTTQKPTTTTTTPAP 458
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -1
Query: 461 TSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAPP*DLLGTSWIRVWRGCT 294
T++TTA P S + T R+ T ++T APP TS W C+
Sbjct: 483 TTTTTAPITVPTVSPTTTTTRQTTTTARTSTTTTTTQAPPTTTTSTSQCASWSACS 538
>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 440 DRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
D P S+S Y+RR P + + T AR +P P
Sbjct: 478 DDIPSDSASVVYVRRSPMQGANTGIARLRPKP 509
>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 440 DRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
D P S+S Y+RR P + + T AR +P P
Sbjct: 519 DDIPSDSASVVYVRRSPMQGANTGIARLRPKP 550
>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 440 DRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
D P S+S Y+RR P + + T AR +P P
Sbjct: 478 DDIPSDSASVVYVRRSPMQGANTGIARLRPKP 509
>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 440 DRAPEGSSSRTYIRRGPTKTSRTSTARKQPAP 345
D P S+S Y+RR P + + T AR +P P
Sbjct: 519 DDIPSDSASVVYVRRSPMQGANTGIARLRPKP 550
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -1
Query: 461 TSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAPP*DLLGTSWIRVWRGCT 294
T++TTA P S + T R+ T ++T APP TS W C+
Sbjct: 483 TTTTTAPITVPTVSPTTTTTRQTTTTARTSTTTTTTQAPPTTTTSTSQCASWSACS 538
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 491 RQRDTRPCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTAR 360
R R+T P P+ S T +PE S R+ R P ++S S +R
Sbjct: 83 RSRETSPAPKRSKETRESESPEKSPVRS---RSPRRSSARSPSR 123
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -1
Query: 542 EPGTXXXXXXXCGS-GDXRQRDTRPCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTST 366
+PGT S R ++TR + R+P SS+R+ R P + S+
Sbjct: 75 QPGTPNSYRSRETSPAPKRSKETRESESPEKSPVRSRSPRRSSARS-PSRSPRRRRERSS 133
Query: 365 ARKQPAPP 342
RKQ P
Sbjct: 134 ERKQSEEP 141
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 491 RQRDTRPCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTAR 360
R R+T P P+ S T +PE S R+ R P ++S S +R
Sbjct: 83 RSRETSPAPKRSKETRESESPEKSPVRS---RSPRRSSARSPSR 123
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -1
Query: 542 EPGTXXXXXXXCGS-GDXRQRDTRPCPETSSTTASDRAPEGSSSRTYIRRGPTKTSRTST 366
+PGT S R ++TR + R+P SS+R+ R P + S+
Sbjct: 75 QPGTPNSYRSRETSPAPKRSKETRESESPEKSPVRSRSPRRSSARS-PSRSPRRRRERSS 133
Query: 365 ARKQPAPP 342
RKQ P
Sbjct: 134 ERKQSEEP 141
>AL032626-21|CAD45606.2| 433|Caenorhabditis elegans Hypothetical
protein Y37D8A.23c protein.
Length = 433
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 81 RQRGWFYIRSARGGLHLVANGHIFYEDGGSHPRRVTWRCARSYQKAERCQVALCLRDGV 257
R + WF++ +A GG L++ H + G VTW + +C L +DG+
Sbjct: 205 RHKLWFHVDAAWGGGMLLSPEHRYKLAGIERANSVTWNPHKLMGALLQCSACLFRQDGL 263
>AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical
protein Y37D8A.23b protein.
Length = 445
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 81 RQRGWFYIRSARGGLHLVANGHIFYEDGGSHPRRVTWRCARSYQKAERCQVALCLRDGV 257
R + WF++ +A GG L++ H + G VTW + +C L +DG+
Sbjct: 280 RHKLWFHVDAAWGGGMLLSPEHRYKLAGIERANSVTWNPHKLMGALLQCSACLFRQDGL 338
>AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical
protein Y37D8A.23a protein.
Length = 508
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 81 RQRGWFYIRSARGGLHLVANGHIFYEDGGSHPRRVTWRCARSYQKAERCQVALCLRDGV 257
R + WF++ +A GG L++ H + G VTW + +C L +DG+
Sbjct: 280 RHKLWFHVDAAWGGGMLLSPEHRYKLAGIERANSVTWNPHKLMGALLQCSACLFRQDGL 338
>AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid
decarboxylase protein.
Length = 508
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 81 RQRGWFYIRSARGGLHLVANGHIFYEDGGSHPRRVTWRCARSYQKAERCQVALCLRDGV 257
R + WF++ +A GG L++ H + G VTW + +C L +DG+
Sbjct: 280 RHKLWFHVDAAWGGGMLLSPEHRYKLAGIERANSVTWNPHKLMGALLQCSACLFRQDGL 338
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 470 CPE--TSSTTASDRAPEGSSSRTYIRRGPTKTSRTSTARKQPAPP 342
CPE TSS +S R S+ R Y + P+ S+ S + K+ PP
Sbjct: 782 CPEMFTSSVISSPRRQLHSAPRVYYQPRPSLFSQCSVSGKKYEPP 826
>AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transporter
(pgp related)protein 4 protein.
Length = 787
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 VYFRGSH-NHPATYNPSKHESRKFQVDPMEAPAVYVPSRSGKSLLVHDGYTFYLKN 424
+ FR H ++P + + F V+P E A+ PS SGKS + FY+ N
Sbjct: 498 IEFRNVHFSYPTRSDQPILKDLSFTVEPGETVALVGPSGSGKSSCISLLENFYVPN 553
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 485 RDTRPCPETSSTTASDRAPEGSSSRTYIRRGPTKT-SRTSTA 363
R+ RP P T P G + ++RG KT SRT +A
Sbjct: 622 RNVRPIPHTQLVDMLRERPIGYRGKLVVKRGSPKTRSRTPSA 663
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 479 TRPCPETSSTTASDRAPEGSSSRTYIRRGPTK--TSRTSTARKQPAPP*DL 333
T P T + T + +AP ++S T PTK TS ST P P +L
Sbjct: 596 TPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANL 646
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 479 TRPCPETSSTTASDRAPEGSSSRTYIRRGPTK--TSRTSTARKQPAPP*DL 333
T P T + T + +AP ++S T PTK TS ST P P +L
Sbjct: 652 TPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPANL 702
>AL110484-18|CAB54409.1| 357|Caenorhabditis elegans Hypothetical
protein Y38E10A.18 protein.
Length = 357
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 508 QRGGRGHLVPGSGAATYTXPPQLLFHPLTVNMSDGKD 618
++GG G +V G + YT P+ L P T + ++ +D
Sbjct: 100 RKGGAGEVVRGYITSAYTAEPRRLKEPATSSAAEPED 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,690,151
Number of Sequences: 27780
Number of extensions: 412305
Number of successful extensions: 1253
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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