Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0423.Seq
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    26   0.30 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    26   0.30 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   1.6  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.9  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   6.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   8.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 299  NPSKHESRKFQVDPMEAPAVYVPSRSGKSLLVH 397
            N   H +   QV P  AP +YV S +  S+L+H
Sbjct: 1392 NDKLHYTLTVQVPP-SAPVLYVTSSTSSSILLH 1423


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 299  NPSKHESRKFQVDPMEAPAVYVPSRSGKSLLVH 397
            N   H +   QV P  AP +YV S +  S+L+H
Sbjct: 1388 NDKLHYTLTVQVPP-SAPVLYVTSSTSSSILLH 1419


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 580 FHPLTVNMSDGKDIYLRYRVSGH*FTVQ 663
           FH LT N  D    Y +  V+G  FTV+
Sbjct: 226 FHRLTSNTFDYDPRYTKLTVAGESFTVK 253


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 264 TSAAPITIQLRTTP 305
           TSA P TI+ R TP
Sbjct: 327 TSARPTTIETRVTP 340


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 580 FHPLTVNMSDGKDIYLRYRVSGH*FTVQ 663
           FH LT N  D    Y +  + G  FT++
Sbjct: 221 FHRLTSNTFDYDPRYAKMTIDGESFTLK 248


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 402 PSWTNKDFP 376
           PSWTN  FP
Sbjct: 95  PSWTNNIFP 103


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 97  STSDQLAAVCTWSPTDIYFTKTEAHILVASR 189
           ST   L A    +PT+  +   EAHI VA +
Sbjct: 138 STLYALGAKIIRTPTEASWHSPEAHISVAQK 168


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,419
Number of Sequences: 438
Number of extensions: 5023
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)