Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0422.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.0  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.7  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.1  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 385 YSYIMGHLPREVDPLVYNM 441
           +S IM H+   V+P++YN+
Sbjct: 337 FSRIMFHINSAVNPILYNI 355


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 348 LVLVKLPTTANSVP 307
           LV  K+PTT+++VP
Sbjct: 259 LVAEKIPTTSDAVP 272


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 348 LVLVKLPTTANSVP 307
           LV  K+PTT+++VP
Sbjct: 259 LVAEKIPTTSDAVP 272


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = +3

Query: 264  IADWAVDCASGAWSWGRCW 320
            I +W  D     W + +CW
Sbjct: 2430 IEEWNFDGLDLDWEYPKCW 2448


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 180 DLDNMSRAVMTCAPAECV 233
           D+DN       C PA CV
Sbjct: 152 DIDNDPNRAPPCDPAVCV 169


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 5/13 (38%), Positives = 7/13 (53%)
 Frame = +3

Query: 264 IADWAVDCASGAW 302
           +  W +DC  G W
Sbjct: 460 VGHWYLDCGFGPW 472


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 11  PRLLLQIVLNFGNSGTHF 64
           P +  +   N  NSGTHF
Sbjct: 159 PGMTFRYHFNVHNSGTHF 176


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -1

Query: 340 SQVADDSQQRPHDHAPLAQSTAQSAIC 260
           S V  D   RPH H  + +   +  +C
Sbjct: 119 SCVTKDEPFRPHPHNLVGREGCKKGVC 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,052
Number of Sequences: 336
Number of extensions: 2070
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)