Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0422.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071182-1|AAL48804.1|  397|Drosophila melanogaster RE23388p pro...    73   2e-13
AE014298-869|AAF46146.2|  390|Drosophila melanogaster CG3455-PA ...    73   2e-13
AF145310-1|AAF08391.1|  390|Drosophila melanogaster 26S proteaso...    70   2e-12
AY089267-1|AAL90005.1|  398|Drosophila melanogaster AT06668p pro...    69   5e-12
AE014296-2061|AAF49987.1|  398|Drosophila melanogaster CG7257-PA...    69   5e-12
AF252287-1|AAF98331.1|  694|Drosophila melanogaster MIND-MELD pr...    29   2.6  
AE014298-2299|AAS65376.1|  783|Drosophila melanogaster CG9163-PB...    29   2.6  
AE014298-2298|AAF48548.3|  840|Drosophila melanogaster CG9163-PA...    29   2.6  
AE014296-347|AAF47561.2| 1314|Drosophila melanogaster CG13921-PA...    28   8.1  

>AY071182-1|AAL48804.1|  397|Drosophila melanogaster RE23388p
           protein.
          Length = 397

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 37/60 (61%), Positives = 42/60 (70%)
 Frame = +1

Query: 283 IARAAHGRGDAVGCRRQLD*NELKGRTRVAPGHDYSYIMGHLPREVDPLVYNMSHEDPGE 462
           I +A +G    VGCRRQLD  +LK  TRVA       IM +LPREVDPLVYNMSHEDPG+
Sbjct: 78  IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 137


>AE014298-869|AAF46146.2|  390|Drosophila melanogaster CG3455-PA
           protein.
          Length = 390

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 37/60 (61%), Positives = 42/60 (70%)
 Frame = +1

Query: 283 IARAAHGRGDAVGCRRQLD*NELKGRTRVAPGHDYSYIMGHLPREVDPLVYNMSHEDPGE 462
           I +A +G    VGCRRQLD  +LK  TRVA       IM +LPREVDPLVYNMSHEDPG+
Sbjct: 71  IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGD 130


>AF145310-1|AAF08391.1|  390|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p42D protein.
          Length = 390

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 36/60 (60%), Positives = 41/60 (68%)
 Frame = +1

Query: 283 IARAAHGRGDAVGCRRQLD*NELKGRTRVAPGHDYSYIMGHLPREVDPLVYNMSHEDPGE 462
           I +A +G    VGCRRQLD  +LK  TRVA       IM +LPREVDPLVYNMSHE PG+
Sbjct: 71  IVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEAPGD 130


>AY089267-1|AAL90005.1|  398|Drosophila melanogaster AT06668p
           protein.
          Length = 398

 Score = 68.5 bits (160), Expect = 5e-12
 Identities = 34/59 (57%), Positives = 42/59 (71%)
 Frame = +1

Query: 283 IARAAHGRGDAVGCRRQLD*NELKGRTRVAPGHDYSYIMGHLPREVDPLVYNMSHEDPG 459
           I +A++G    VGCRRQ++  +LK  TRVA       IM +LPREVDPLVYNM+HEDPG
Sbjct: 79  IVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPG 137


>AE014296-2061|AAF49987.1|  398|Drosophila melanogaster CG7257-PA
           protein.
          Length = 398

 Score = 68.5 bits (160), Expect = 5e-12
 Identities = 34/59 (57%), Positives = 42/59 (71%)
 Frame = +1

Query: 283 IARAAHGRGDAVGCRRQLD*NELKGRTRVAPGHDYSYIMGHLPREVDPLVYNMSHEDPG 459
           I +A++G    VGCRRQ++  +LK  TRVA       IM +LPREVDPLVYNM+HEDPG
Sbjct: 79  IVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPG 137


>AF252287-1|AAF98331.1|  694|Drosophila melanogaster MIND-MELD
           protein.
          Length = 694

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 375 GGNSCSSFKLVLVKLPTTANSVP-TTMRRSRNQRP 274
           GGN CSS  L+   LPT A   P  T++  + + P
Sbjct: 607 GGNDCSSVVLLTTALPTEALPTPENTIKMEKKETP 641


>AE014298-2299|AAS65376.1|  783|Drosophila melanogaster CG9163-PB,
           isoform B protein.
          Length = 783

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 375 GGNSCSSFKLVLVKLPTTANSVP-TTMRRSRNQRP 274
           GGN CSS  L+   LPT A   P  T++  + + P
Sbjct: 696 GGNDCSSVVLLTTALPTEALPTPENTIKMEKKETP 730


>AE014298-2298|AAF48548.3|  840|Drosophila melanogaster CG9163-PA,
           isoform A protein.
          Length = 840

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 375 GGNSCSSFKLVLVKLPTTANSVP-TTMRRSRNQRP 274
           GGN CSS  L+   LPT A   P  T++  + + P
Sbjct: 696 GGNDCSSVVLLTTALPTEALPTPENTIKMEKKETP 730


>AE014296-347|AAF47561.2| 1314|Drosophila melanogaster CG13921-PA,
           isoform A protein.
          Length = 1314

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 393 VRVVMSGGNSCSSFKLVLVKLPTTANSVPTTMRRS 289
           V+ + SGG SC+S  L  ++ P T+ S  T  R S
Sbjct: 354 VQNICSGGWSCASLLLSSIQYPLTSTSTSTRPRPS 388


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,799,917
Number of Sequences: 53049
Number of extensions: 446315
Number of successful extensions: 1303
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)