Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0421.Seq
(852 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 184 2e-47
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 93 6e-20
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 91 2e-19
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 89 7e-19
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 83 4e-17
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 64 2e-11
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 62 7e-11
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 60 3e-10
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 59 9e-10
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 56 5e-09
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 52 1e-07
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 51 2e-07
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 51 2e-07
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 47 4e-06
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 46 5e-06
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 46 9e-06
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 45 1e-05
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 45 1e-05
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 44 3e-05
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 39 8e-04
SPAC12G12.02 ||SPAC630.01c|rRNA processing protein, unnamed|Schi... 33 0.039
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 33 0.051
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 32 0.090
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 31 0.21
SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 0.63
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.84
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 29 1.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.4
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 27 3.4
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 27 3.4
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.5
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 27 4.5
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 27 4.5
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 4.5
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 26 5.9
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 26 5.9
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 26 7.8
SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|... 26 7.8
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 184 bits (447), Expect = 2e-47
Identities = 100/184 (54%), Positives = 120/184 (65%), Gaps = 1/184 (0%)
Frame = +2
Query: 251 LEQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 430
L+QL E+FIVKA++GPRYVVGCR +D++ L G RV+LDMTTLTIMR LPREVDPLVY
Sbjct: 60 LKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVY 119
Query: 431 NMSHEDPGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSLH-PKDVCCTDLLVQE 607
NMS EDPGD++++ +GG P LF V + PK V
Sbjct: 120 NMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPE-LFLRVGIKPPKGVLLYGPPGTG 178
Query: 608 RLCSRGAVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAIR 787
+ AVA+ L NFLKVVSSAIVDKYIGES R+IREMF YA++H+P MDEIDAI
Sbjct: 179 KTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIG 238
Query: 788 WETF 799
F
Sbjct: 239 GRRF 242
Score = 68.9 bits (161), Expect = 8e-13
Identities = 30/57 (52%), Positives = 46/57 (80%)
Frame = +3
Query: 84 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVL 254
R+ A + Y+ L++H+E +S+LK+ R +DL K+YDK+E+D+K+LQSVGQI+GEVL
Sbjct: 4 RDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVL 60
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = +3
Query: 750 PCIISWTRSMPFGGRRFSEGTKRRFEEIQRTLM 848
PC+I GGRRFSEGT EIQRTLM
Sbjct: 226 PCVIFMDEIDAIGGRRFSEGTSAD-REIQRTLM 257
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 92.7 bits (220), Expect = 6e-20
Identities = 60/179 (33%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Frame = +2
Query: 251 LEQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 430
++ + + K +VK +YVV +D ++K RVAL + +++ LP +VDPLV
Sbjct: 73 IKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVS 132
Query: 431 NMSHEDPGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSL-HPKDVCCTDLLVQE 607
M E D TY +GG P LFES+ + PK +
Sbjct: 133 LMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPV-KHPELFESLGIPQPKGILLYGPPGTG 191
Query: 608 RLCSRGAVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
+ AVA D F++V S +V KYIGE R++RE+F AR+H P MDEID+I
Sbjct: 192 KTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 250
Score = 66.1 bits (154), Expect = 6e-12
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARGCGFTARC 648
++VIELP+ +PELF +GI PKG LLYGPPGTGKTLLAR C
Sbjct: 158 KEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDC 205
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 91.1 bits (216), Expect = 2e-19
Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Frame = +2
Query: 248 SLEQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLV 427
+LE++ ++ + +T GP Y V +DK+ L+ G V L ++I+ L + DP++
Sbjct: 118 TLEEIIDDDHAIVSTAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMI 177
Query: 428 YNMSHEDPGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSLHP-KDVCCTDLLVQ 604
M + +Y+ IGG P T L+E + + P K V
Sbjct: 178 NVMKLDKAPTESYADIGGLESQIQEIKEAVELPL-THPELYEEMGIKPPKGVILYGAPGT 236
Query: 605 ERLCSRGAVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
+ AVA+Q A FL+VV S ++ KY+G+ RL+R++FN A +H P +DEIDAI
Sbjct: 237 GKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAI 296
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 89.0 bits (211), Expect = 7e-19
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Frame = +2
Query: 251 LEQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 430
LE + + IV +T G YVV LD+ LK VAL + ++ LP E D +
Sbjct: 62 LEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSIS 121
Query: 431 NMSHEDPGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSLHP-KDVCCTDLLVQE 607
+ ++ DV+Y+ +GG P TQ L+ + + P + V
Sbjct: 122 MLRPDERPDVSYADVGGLDVQKQEVREAVELPL-TQGDLYRQIGIDPPRGVLLYGPPGTG 180
Query: 608 RLCSRGAVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAIR 787
+ AVA+ ANF++VV S V KY+GE R++R++F AR++ P +DEIDAI
Sbjct: 181 KTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIA 240
Query: 788 WETF 799
+ F
Sbjct: 241 TKRF 244
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 108 RKKLMEHKEVESRLKEG--RDQLKDLTKQYDKSENDLKALQSVGQIVGEVLNS 260
R K +E + L+EG ++ K L ++ +++ ++K +QSV ++G+ L +
Sbjct: 12 RWKALERQLEMLDLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEA 64
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 83.4 bits (197), Expect = 4e-17
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Frame = +2
Query: 254 EQLTEEK-FIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVY 430
EQ E+ +++ ++VV ++ ++ G RV D I LP ++DP V
Sbjct: 107 EQSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVT 166
Query: 431 NMSHEDPGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSLHPKDVCCTDLL-VQE 607
M E+ DVTY +GG P + + PK + +
Sbjct: 167 MMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGK 226
Query: 608 RLCSRGAVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
LC+R AVA++ DA F++V+ S +V KY+GE R++RE+F AR + DEIDAI
Sbjct: 227 TLCAR-AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAI 284
Score = 68.1 bits (159), Expect = 1e-12
Identities = 28/39 (71%), Positives = 35/39 (89%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
+V+ELPL++PE FV++GI PPKG +LYGPPGTGKTL AR
Sbjct: 193 EVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCAR 231
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 64.1 bits (149), Expect = 2e-11
Identities = 25/39 (64%), Positives = 34/39 (87%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
+++ELPL +P+LF +GI PP+G L+YGPPGTGKTL+AR
Sbjct: 238 ELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMAR 276
Score = 56.4 bits (130), Expect = 5e-09
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
+ +++P+M E F+R G+TP KG L +GPPGTGKTLLA+
Sbjct: 511 ETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAK 549
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
A+A++ ANF+ V ++ + GES +R++F+ AR P +DE+D+I
Sbjct: 550 AIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSI 602
Score = 34.3 bits (75), Expect = 0.022
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
AVA++ A F + I+ K GES +R+ F A + P +DEID+I
Sbjct: 277 AVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSI 329
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 62.5 bits (145), Expect = 7e-11
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARGC 630
+ I LP+ + F ++G+ PPKGCL++GPPGTGKTLLAR C
Sbjct: 199 EAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARAC 239
Score = 54.8 bits (126), Expect = 1e-08
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Frame = +2
Query: 329 LDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGXXXXXXXXX 508
++ +L G + ++ + I+ LP E D V M ++ YS IGG
Sbjct: 139 VEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELF 198
Query: 509 XXXNFP**TQSCLFESVSLHPKDVCCT--DLLVQERLCSRGAVASQLDANFLKVVSSAIV 682
P Q+ F + + P C + L +R A A+Q +A FLK+ + +V
Sbjct: 199 EAIVLPM-QQADKFRKLGVKPPKGCLMFGPPGTGKTLLAR-ACAAQSNATFLKLAAPQLV 256
Query: 683 DKYIGESGRLIREMFNYARDHQPLHHIMDEIDAIRWETF 799
+IG+ +L+R+ F A++ P +DE+DAI + F
Sbjct: 257 QMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRF 295
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 60.5 bits (140), Expect = 3e-10
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +1
Query: 511 VIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARGCGFTARC*LF 657
++ELP NPELF I PP+G LLYGPPGTGKT++ R A +F
Sbjct: 294 IVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVF 342
Score = 51.6 bits (118), Expect = 1e-07
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 514 IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
+E PL + E F R+G+ PPKG LLYGPPG KT+ A+
Sbjct: 564 VEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAK 600
Score = 47.2 bits (107), Expect = 3e-06
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
A+A++ NF+ V + DK++GES R +R++F AR P DEIDA+
Sbjct: 601 AIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDAL 653
Score = 46.0 bits (104), Expect = 7e-06
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Frame = +2
Query: 449 PGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSLHP-KDVCCTDLLVQERLCSRG 625
P VT+S+IGG P LF+ ++ P + V +
Sbjct: 273 PSAVTFSSIGGLQAQIAQIRDIVELPFQNPE-LFKFFNIMPPRGVLLYGPPGTGKTMVMR 331
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
AVA++ +A + ++V KY+GE+ +R++F AR HQP +DEIDA+
Sbjct: 332 AVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDAL 384
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 58.8 bits (136), Expect = 9e-10
Identities = 23/40 (57%), Positives = 34/40 (85%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
++++ LPL+ PE+F+ + ITPP+G L +GPPGTGKTL+AR
Sbjct: 385 KEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMAR 424
Score = 31.5 bits (68), Expect = 0.16
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2
Query: 596 LVQERLCSRGAVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEI 775
L+ L + + +Q + FL+ S + K++GE+ R +R +F AR QP DEI
Sbjct: 421 LMARVLAANCSTKNQKISFFLRKGSDCL-SKWVGEAERQLRLLFEEARRVQPSIIFFDEI 479
Query: 776 DAI 784
D +
Sbjct: 480 DGL 482
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 56.4 bits (130), Expect = 5e-09
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
++++ LPL+ PE+F R + PP+G L +GPPGTGKTL+AR
Sbjct: 279 KEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMAR 318
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 680 VDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
+ K++GE+ R +R +F A+ QP DEID +
Sbjct: 342 LSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGL 376
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 69 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYD 194
+++PL +AFQD K L + V S+L + + D K+ D
Sbjct: 544 ELKPLLNEAFQDIEKTLQKLMPVASKLNPLEEVMYDDPKEND 585
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 52.0 bits (119), Expect = 1e-07
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +1
Query: 514 IELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
++LPL PELF + G+ P G LLYGPPGTGKTLLA+
Sbjct: 671 LQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAK 706
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
AVA++L F+ + +++ Y+GES +R +F AR+ P DE+D+I
Sbjct: 707 AVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSI 759
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 51.2 bits (117), Expect = 2e-07
Identities = 19/38 (50%), Positives = 30/38 (78%)
Frame = +1
Query: 508 KVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLA 621
+++ +P+ +PE++ GI PP+G LL+GPPG GKT+LA
Sbjct: 188 ELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLA 225
Score = 50.4 bits (115), Expect = 3e-07
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
+ I P+ PEL+ VGI+ P G LL+GPPG GKTLLA+
Sbjct: 505 QMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAK 544
Score = 46.8 bits (106), Expect = 4e-06
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
AVA++ ANF+ + +++KY+GES R +R++F AR P DE+DA+
Sbjct: 545 AVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAM 597
Score = 41.5 bits (93), Expect = 1e-04
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +2
Query: 437 SHEDPGDVTYSAIGGXXXXXXXXXXXXNFP**TQSCLFESVSLHP-KDVCCTDLLVQERL 613
+ E P D++ S IGG P +++ +HP + V +
Sbjct: 164 NREPPSDISLSDIGGLDDCINELLELVAMPI-KHPEVYQYTGIHPPRGVLLHGPPGCGKT 222
Query: 614 CSRGAVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
A+A++L F+ + + +IV GES + +RE+F A+ P +DEIDA+
Sbjct: 223 MLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAV 279
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 50.8 bits (116), Expect = 2e-07
Identities = 22/53 (41%), Positives = 37/53 (69%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
AVA++ + F + SS +V K++GES RL+R++F AR+ +P +DEID++
Sbjct: 181 AVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSL 233
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
++ + LP+ P+LF G P G LLYGPPGTGK+ LA+
Sbjct: 142 KETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAK 180
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 46.8 bits (106), Expect = 4e-06
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = +1
Query: 493 D*TAEKVIELP--LMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
D E+++E L NP+ + R+G P+G +L GPPGTGKTLLA+
Sbjct: 302 DEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAK 347
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
A A + + FL V S ++ ++G +R++F AR + P +DEIDAI
Sbjct: 348 ATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAI 400
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 46.4 bits (105), Expect = 5e-06
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKTLLARGCG 633
L P + ++GI KG LLYGPPGTGKTL+AR G
Sbjct: 290 LFPPGMVEKLGINHVKGILLYGPPGTGKTLIARQIG 325
Score = 27.5 bits (58), Expect = 2.6
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 9/61 (14%)
Frame = +2
Query: 629 VASQLDANFLKVVSSA-IVDKYIGESGRLIREMFNYAR-------DHQPLHHIM-DEIDA 781
+ L+A K+V+ I++KY+G+S +R++F A + LH I+ DE+DA
Sbjct: 324 IGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDA 383
Query: 782 I 784
I
Sbjct: 384 I 384
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 45.6 bits (103), Expect = 9e-06
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARGCGFTARC*LF 657
++ + P + PELF + P +G LL+GPPGTGKT+LAR A+ F
Sbjct: 392 KEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEAKATFF 441
Score = 42.3 bits (95), Expect = 8e-05
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
AVA++ A F + +S++ KY+G+S +L+R +F A+ +DEID+I
Sbjct: 431 AVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSI 483
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARGCGFTARC*LF 657
++ + P + P+LF + P +G LL+GPPGTGKT+LAR +R F
Sbjct: 472 KEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRSVFF 521
Score = 41.5 bits (93), Expect = 1e-04
Identities = 18/53 (33%), Positives = 34/53 (64%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
AVA++ + F + +S++ K++GES +L+R +F A+ P +DEID++
Sbjct: 511 AVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSL 563
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1
Query: 505 EKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
E++++ L +P F R+G P+G LL GPPGTGKT+LAR
Sbjct: 280 EEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLAR 318
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
AVA + + F + S + Y+G + +RE+F AR P +DE+DAI
Sbjct: 319 AVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAI 371
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 44.0 bits (99), Expect = 3e-05
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAIRWETFFR 805
A+A Q A F+ V + DK+ GES +L+ +F AR +P +DEID +
Sbjct: 144 ALAKQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRT 203
Query: 806 RHEA 817
HEA
Sbjct: 204 DHEA 207
Score = 43.6 bits (98), Expect = 4e-05
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = +1
Query: 523 PLMNPELFVRVG--ITPPKGCLLYGPPGTGKTLLAR 624
PL PE+F G ++ PKG LLYGPPG GKT+LA+
Sbjct: 108 PLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAK 143
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 39.1 bits (87), Expect = 8e-04
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +2
Query: 626 AVASQLDANFLKVVSSAIVDKYIGESGRLIREMFNYARDHQPLHHIMDEIDAI 784
A++S F+ + ++DKYIG+S + +R++F+ A+ +P DE D++
Sbjct: 659 AISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSV 711
Score = 32.7 bits (71), Expect = 0.068
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 511 VIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLARGCGFT 639
+IE P+ ++ + + P G LL+G PG GKT LA T
Sbjct: 621 IIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISST 663
>SPAC12G12.02 ||SPAC630.01c|rRNA processing protein,
unnamed|Schizosaccharomyces pombe|chr 1|||Manual
Length = 183
Score = 33.5 bits (73), Expect = 0.039
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 60 STSDMEPLREKAFQDYRK-KLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 224
S + +E ++K F+ Y+K + E K+ E R+K+ LKD T +K + K+++
Sbjct: 48 SMAQLEHKKQKIFERYKKVRFFERKKAERRIKQLEKSLKDETMDDEKRKQCEKSMR 103
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 33.1 bits (72), Expect = 0.051
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 526 LMNPELFVRVGITPPKGCLLYGPPGTGKT 612
L N + + GI +G LLYGPPG+GKT
Sbjct: 228 LRNSQWYDTRGIPYRRGYLLYGPPGSGKT 256
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 32.3 bits (70), Expect = 0.090
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 87 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL 212
+K +D RKKL E +E ES L+ R++L+ +S NDL
Sbjct: 571 DKLVEDVRKKLQEKEEAESSLRSVRERLEIRISLSVQSINDL 612
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 31.1 bits (67), Expect = 0.21
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +3
Query: 57 ASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQ 236
A+ SD++ + + Y ++L + K++ ++ + Q + + ++Y E L ALQ +
Sbjct: 531 ANLSDVKAKVSEIRKAYDEELAKAKQISLDIETNKAQTEQVNREYSILEATLNALQKQNK 590
Query: 237 IVGEVL 254
GEVL
Sbjct: 591 QKGEVL 596
>SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 29.5 bits (63), Expect = 0.63
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 78 PLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQS 227
PL YRK L K+V+ L E + LK L K+ K +ND + L++
Sbjct: 184 PLYPNGQPKYRKILENGKKVKYLLDENGEILKRLVKKEKKLKNDNERLEN 233
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 29.1 bits (62), Expect = 0.84
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 66 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK-ALQSVGQIV 242
S E +RE+ Q KKL + + ++SRL + R Q++ Y S + LK + S+ Q V
Sbjct: 404 SSCETIREEN-QKNIKKLNDAESLKSRLLQSRTQMQTELDSYITSNSQLKDEITSLKQTV 462
Query: 243 GE 248
E
Sbjct: 463 SE 464
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 580 LLYGPPGTGKTLLARGC 630
L YGPPGTGKT C
Sbjct: 60 LFYGPPGTGKTSTILAC 76
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 632 PQPLASKVFPVPGGPYSKHPLGGVIPTRTNSSGFIR 525
PQP V P P G S+ P + P RT +GFI+
Sbjct: 125 PQPTGF-VQPQPTGFMSQQPASFMQPQRTGGAGFIQ 159
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 547 VRVGITPPKGCLLYGPPGTGKT 612
V+ I + L++GPPGTGKT
Sbjct: 218 VKFSIAVKELSLIHGPPGTGKT 239
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 547 VRVGITPPKGCLLYGPPGTGKTLLARG 627
++ G + L+ GPP TGKT +A G
Sbjct: 58 IQEGRIAGRAILMAGPPSTGKTAIAMG 84
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2685
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 787 PNGIDLVHDMMQGLVVPRVVEHLPDEAARF 698
P ID HD+ + + PRVV H+ ++ +F
Sbjct: 889 PLTIDQQHDLAEEIKQPRVVPHIQIKSTKF 918
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -3
Query: 238 ICPTLCKAFRSFSLLSYCLVKSFSWSRP---SLSRDSTSLCSMSFFL*SWKA 92
+ PTL + RS S+L + L KSF+ + P + +R T +MS S+ A
Sbjct: 410 VTPTLHRNERSMSVLPFQLAKSFTSALPRRLTFNRTHTKASTMSLPYLSYNA 461
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 475 RRSSRTD*TAEKVIELPLMNPELFVRVGITPPKGCLLYGPPGTGKTLLAR 624
R++ RT ++K + +P+++ PP + GPPGTGK+ L +
Sbjct: 46 RQAMRTADISQKKLHVPMVDR---TPDEAPPPVIVAVMGPPGTGKSTLIK 92
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 544 FVRVGITPPKGCLLYGPPGTGKTLLARG 627
F+ +T + + GPPG+GK++L G
Sbjct: 2505 FLNFSLTKNRCVIFCGPPGSGKSMLMLG 2532
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/28 (32%), Positives = 21/28 (75%)
Frame = -1
Query: 624 PREQSLSCTRRSVQQTSFGWSDTDSNKQ 541
PRE++++ TR++ ++ +SD+D+ +Q
Sbjct: 216 PREENVTITRKTKLSSNILYSDSDTERQ 243
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 547 VRVGITPPKGCLLYGPPGTGKTL 615
VR ++ P L+ GPPGTGKT+
Sbjct: 401 VRAVLSKPLS-LIQGPPGTGKTV 422
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 568 PKGCLLYGPPGTGKTLL 618
PKG LYG G GKT L
Sbjct: 118 PKGIYLYGDVGCGKTAL 134
>SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit
Mts4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 159 RDQLKDLTKQYDKSENDLKAL-QSVGQIVGEVLNSS 263
RD+L+DL+++ + +NDL+ L Q+V E++ SS
Sbjct: 40 RDELEDLSEEDLQLKNDLELLVQAVQDATPELVGSS 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,554,779
Number of Sequences: 5004
Number of extensions: 75207
Number of successful extensions: 328
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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