Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0421.Seq
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   2.0  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   4.7  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   4.7  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   4.7  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   4.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   8.2  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 81  LREKAFQDYRKKLMEHKEVESR 146
           +RE+  + YR+ L+EHK+  +R
Sbjct: 139 IREQTEEMYREMLLEHKKRRAR 160


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 736 AGPPTLASYHGRDRCHSVGDVFPKARSAGSRR 831
           +GP  L  +   D C    D+ P   SAG  +
Sbjct: 44  SGPNELGRFKHTDACCRTHDMCPDVMSAGESK 75


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 736 AGPPTLASYHGRDRCHSVGDVFPKARSAGSRR 831
           +GP  L  +   D C    D+ P   SAG  +
Sbjct: 49  SGPNELGRFKHTDACCRTHDMCPDVMSAGESK 80


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 645 SSCEATAPREQSLSCTRRSVQQTSFGWSDTDSN 547
           SSC   A    +L   RRSV + S G + + S+
Sbjct: 154 SSCGPGAAAAAALLSKRRSVSECSLGTASSTSS 186


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 736 AGPPTLASYHGRDRCHSVGDVFPKARSAGSRR 831
           +GP  L  +   D C    D+ P   SAG  +
Sbjct: 49  SGPNELGRFKHTDACCRTHDMCPDVMSAGESK 80


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -3

Query: 850 PIRVRWISSNRRFVPSEKRLPPNGIDLVHDMMQGLVVPRVVEHL-PDEAARFTDVLVN 680
           P+ + W+   R   PSE R+    +D  + ++       ++EHL PD    ++ V  N
Sbjct: 640 PLSISWLKDGRAMGPSE-RVHVTNMDQYNSIL-------MIEHLSPDHNGNYSCVARN 689


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 91   RPSRITERSSWSIRKSSHDSKKVVTN*KI*PNNMTRVK 204
            +P  +  RS+ +   +  D+  VVT  K   +N+T  K
Sbjct: 983  KPPSVVSRSTQTSANNDKDTNAVVTQSKEARDNITATK 1020


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,679
Number of Sequences: 438
Number of extensions: 5302
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)