Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0420.Seq
(547 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0703 + 6212409-6212456,6212661-6212742,6214031-6214106,621... 52 2e-07
11_06_0257 + 21746643-21748091 32 0.34
03_01_0112 + 902459-902770,903275-903280 30 1.0
09_04_0652 - 19227686-19227926,19229368-19232294 30 1.4
07_01_0013 - 99952-100413,100534-100704 29 1.8
03_02_0505 + 8981856-8982879,8983014-8983129,8985407-8985994,898... 29 1.8
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859 29 3.2
02_01_0479 + 3453989-3454092,3454674-3454706,3454757-3454853,345... 29 3.2
11_06_0629 + 25646268-25646591 28 4.2
11_06_0135 - 20470247-20470906 28 4.2
09_04_0356 - 16925821-16925969,16926056-16926165,16926261-169263... 28 4.2
02_01_0530 - 3853274-3853666 28 4.2
12_01_0326 - 2520743-2520926,2521019-2521107,2522039-2522500 28 5.6
12_01_0092 + 726892-727247,727338-727347 28 5.6
11_01_0092 + 683869-684224,684315-684324 28 5.6
10_08_0875 + 21212413-21212758,21215931-21217357 28 5.6
10_08_0415 - 17761594-17762382 28 5.6
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 28 5.6
12_02_0711 + 22404710-22404824,22405726-22406288,22406386-224065... 27 7.4
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 27 7.4
05_05_0091 + 22319411-22320901 27 7.4
03_01_0645 - 4731037-4731543,4731706-4731933 27 7.4
03_01_0113 + 905535-905840,906601-906812,906929-907196,907314-90... 27 7.4
>08_01_0703 +
6212409-6212456,6212661-6212742,6214031-6214106,
6214498-6214594,6214760-6214862,6214973-6215103,
6215285-6215462,6215528-6215715,6215945-6216154,
6216231-6216578,6216660-6216786,6217304-6217455
Length = 579
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +3
Query: 132 GLTVQDVSDITRAPEMLGGRVKTLHPAVHAGILAR 236
G+ V V IT PEML GRVKTLHP+VH GILAR
Sbjct: 86 GVNVTKVEQITNFPEMLDGRVKTLHPSVHGGILAR 120
Score = 37.1 bits (82), Expect = 0.009
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 3/136 (2%)
Frame = +2
Query: 11 KLALLSVSDKMGLLSLAKSLLECGLQLIASCGTAT---AASERRPHSSRCVGHHESTGDA 181
K AL+S+SDK L L L G +I++ GTA+ AA + E
Sbjct: 46 KQALISLSDKTDLAYLGNGLQALGFSIISTGGTASSLEAAGVNVTKVEQITNFPEMLDGR 105
Query: 182 RRSGENFTSSGTCWDLSSIMRL*PEDMKRQMYEMISLVVCNLYPFVQTVSTLDVTVADAV 361
++ G L + + +VV NLYPF V++ ++ D +
Sbjct: 106 VKTLHPSVHGGILARRDQEHHL--KALNEHGIGTFDVVVVNLYPFYNKVTSGVISFEDGI 163
Query: 362 DNIDICCVTLLLSQHK 409
+NIDI T++ + K
Sbjct: 164 ENIDIGGPTMIRAAAK 179
>11_06_0257 + 21746643-21748091
Length = 482
Score = 31.9 bits (69), Expect = 0.34
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 179 HLRCSRDVRHILNCEAGVPKRPWRYRNWQST 87
HL C++ R+++N +G WR+R W S+
Sbjct: 300 HLPCAQPCRYLVNTPSGELLHVWRFRQWVSS 330
>03_01_0112 + 902459-902770,903275-903280
Length = 105
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 188 TSEHLRCSRDVRHILNCEAGVPKRPWRYR 102
T+ LR RD RH+ CE+GVPK R++
Sbjct: 58 TATRLRL-RDGRHLAYCESGVPKEEARFK 85
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 62 KSLLECGLQLIASCGTATAASERRPHSSRCVGHHESTGDARRSGENFTSSGTCW 223
+++ E LI + SE+ P S C S + ++G + GTCW
Sbjct: 427 QTVAEGNNSLIPGSESGQVVSEKEPEPSECSESCASVPNLEQTGTSNVEDGTCW 480
>07_01_0013 - 99952-100413,100534-100704
Length = 210
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 26 SVSDKMGLLSLAKSLLECGLQLIASCGTATAASERRPH 139
SV +G L+LAKS++E + ATAA +++PH
Sbjct: 153 SVPSHVGYLTLAKSVVETSDLATGTLHQATAALDQQPH 190
>03_02_0505 +
8981856-8982879,8983014-8983129,8985407-8985994,
8986091-8986192
Length = 609
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 43 GSTLVSKEPVGMWPAVDC---QLRYRHGRFGTPASQFKMCR 156
G + ++PVG WPA C ++ RFG AS +M R
Sbjct: 129 GHVWLDEQPVGPWPAATCPPYRVSADASRFGDRASASRMAR 169
>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
Length = 429
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +1
Query: 265 TSDVRDDKLGGL*PVPVRPDGIYSGRDRCGRGRQHRHLLRDPPALTAQAPRPGHRR 432
TSD+ DD L L P G RGR+ + L P A AP PG RR
Sbjct: 290 TSDLPDDHL--LPPGKKSKHGKNGKNKPKKRGRKPKQLPPHPSGAAASAPAPGDRR 343
>02_01_0479 +
3453989-3454092,3454674-3454706,3454757-3454853,
3455023-3455081,3455545-3455619,3455726-3455798,
3455927-3456047,3456357-3456444,3456546-3456671,
3456771-3456880,3457004-3457152
Length = 344
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +2
Query: 314 FVQTVSTLDVTVADAVDN---IDICCVTLLLSQHKLLDRVTAGCNRSSTILQSK 466
F VS D VD+ ++I + +LS H L RV GC +S +L K
Sbjct: 164 FATAVSLWDADFYVKVDDDVHVNIATLGQILSNHALKPRVYIGCMKSGPVLTEK 217
>11_06_0629 + 25646268-25646591
Length = 107
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 328 IYSGRDRCGRGRQHRHLLRDPPALTAQAPRPGHR 429
I GR G G HRH L PP L + G R
Sbjct: 55 ICGGRKARGGGGSHRHRLLHPPDLAREEGEKGRR 88
>11_06_0135 - 20470247-20470906
Length = 219
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 91 DCQLRYRHGRFGTPASQFKMCRTSREHRRCSEVG*KLYIQRYMLGS*LDYATL 249
D +RYR P +++C +REHR C V + ++ L +D A L
Sbjct: 38 DQNIRYRVEDSELPDLYYEICMYAREHRPCRRVMATIPDLKFKLSGQVDLALL 90
>09_04_0356 -
16925821-16925969,16926056-16926165,16926261-16926386,
16926485-16926572,16926648-16926768,16926902-16926974,
16927395-16927458,16928019-16928062,16928160-16928218,
16928771-16928870,16929043-16929146
Length = 345
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 341 VTVADAVDNIDICCVTLLLSQHKLLDRVTAGCNRSSTILQSKQSK 475
V V D V ++++ + L +HKL RV GC +S +L K K
Sbjct: 178 VKVDDDV-HVNLGMLITTLGRHKLKPRVYIGCMKSGPVLADKNVK 221
>02_01_0530 - 3853274-3853666
Length = 130
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +1
Query: 289 LGGL*PVPVRPDGIYSGRDRCGRGRQHRHLLRDPPALTAQAPRPGHRRL 435
+GG P V + + R CG GR R L R AL A P P RL
Sbjct: 8 VGGQPPSSVAAAAVVARRCGCGLGRLVRRLRRQ-AALCAARPAPASSRL 55
>12_01_0326 - 2520743-2520926,2521019-2521107,2522039-2522500
Length = 244
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 241 ATLTRRHETSDVRDDKLGGL*PVPVRP-DGIYSGRDRCGRGRQHRHLLRDPPA 396
A+ T H T D K G + V + P + + RCG G + LR PPA
Sbjct: 95 ASATGDHATYSYSDYKSGAIHHVTIGPLEPATTYYYRCGAGEEEELSLRTPPA 147
>12_01_0092 + 726892-727247,727338-727347
Length = 121
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 14 LALLSVSDKMGLLSLAKSLLECG--LQLIASCGTATAASERRPHSSRCVGHHESTGDARR 187
+AL++V + A + + CG IA C + E P SS C G G A
Sbjct: 11 VALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASS 70
Query: 188 SGENFTSSGTCWDLSSIMR 244
S + T+ +++S R
Sbjct: 71 SADRRTACSCLKNMASSFR 89
>11_01_0092 + 683869-684224,684315-684324
Length = 121
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 14 LALLSVSDKMGLLSLAKSLLECG--LQLIASCGTATAASERRPHSSRCVGHHESTGDARR 187
+AL++V + A + + CG IA C + E P SS C G G A
Sbjct: 11 VALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASS 70
Query: 188 SGENFTSSGTCWDLSSIMR 244
S + T+ +++S R
Sbjct: 71 SADRRTACSCLKNMASSFR 89
>10_08_0875 + 21212413-21212758,21215931-21217357
Length = 590
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 220 LGS*LDYATLTRRHETSDVRDDKLGGL*PVPVRPDGIYSGRDRCGRGRQHRHLL 381
LGS + ++R S + + G + ++PD R++CG G HR+++
Sbjct: 8 LGSPDASSNSSKRKRGSCFAERNMDGRNSIRIKPDVSVRAREKCGGGGGHRYVI 61
>10_08_0415 - 17761594-17762382
Length = 262
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/81 (25%), Positives = 33/81 (40%)
Frame = +2
Query: 2 SNGKLALLSVSDKMGLLSLAKSLLECGLQLIASCGTATAASERRPHSSRCVGHHESTGDA 181
S K+ + S K L+ K L G + S G R +S C G + +
Sbjct: 85 SGKKVDASNNSGKPRWLAATKGLDHNGGVGVFSLGAWRYKGVARQSASMCCGQLDHSSGM 144
Query: 182 RRSGENFTSSGTCWDLSSIMR 244
GE + +G C D++ I+R
Sbjct: 145 HDDGEVWLRAGPCSDIAGIVR 165
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 200 SFHPTSEHLRCSR-DVRHILNCEAGVPKRPWRYRNWQST 87
S HP S H S+ D I +C A V WR R+ +T
Sbjct: 791 SHHPFSAHAHYSQPDFPTIASCRAAVASSKWRRRHPSTT 829
>12_02_0711 +
22404710-22404824,22405726-22406288,22406386-22406547,
22406664-22407257
Length = 477
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 29 VSDKMGLLSLAKSLLECGLQLIASCGTATAASERRPHSSRC 151
++++ L LAK ECG L+ S GT A+ E + +C
Sbjct: 293 IAEEKARLFLAKPPEECGRFLLLSIGTGLASDEGLYTAEKC 333
>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 17 ALLSVSDKMGLLSLAKSLLECGLQLIASCG 106
AL S++D+M LLS+ K L+C +Q ++ G
Sbjct: 1400 ALGSLTDEMALLSVGKDELDCEVQELSRRG 1429
>05_05_0091 + 22319411-22320901
Length = 496
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 253 WSESHNRAKIPACTAGCKVFTRPPSISGALV 161
WS+S+ +A I A C VF R + GA V
Sbjct: 214 WSQSYEKAVILMARAACAVFVRVCVVFGAHV 244
>03_01_0645 - 4731037-4731543,4731706-4731933
Length = 244
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 328 IYSGRDRCGRGRQHRHLLRDPPALTAQAPRP--GHRRL*PVEYDSAVKA 468
I SG+ R H+ RDP A AP P HRR P E + +A
Sbjct: 75 IKSGQIHYYNTRTHKRTSRDPRAEAPPAPAPESHHRRAAPAEEEEEEEA 123
>03_01_0113 +
905535-905840,906601-906812,906929-907196,907314-907595
Length = 355
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -3
Query: 164 RDVRHILNCEAGVPKRPWRYRNWQSTAGHIPTGSLLTRVDPS 39
RD RH+ E+GV K RY+ H TGS L V PS
Sbjct: 63 RDGRHLAYAESGVRKEDARYK---VVFSHGFTGSRLDSVRPS 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,222,622
Number of Sequences: 37544
Number of extensions: 325451
Number of successful extensions: 999
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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