Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0419.Seq
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.9  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   6.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   6.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 9/95 (9%)
 Frame = -1

Query: 491  PICCNIWLMFIN*ELARQYLYGGAH----GLTCSKGRGSSCS*FTSLFSPNSS-----MK 339
            P  CN +   +  EL +QY  GG H       C   + + C        P++S      K
Sbjct: 1112 PHNCNAYYRCVLGELRKQYCAGGLHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTK 1171

Query: 338  TRHGPPSGLISWM*QWKGTGCSDSNLHKT*LQLVE 234
              + PPS    W  Q K T  + +    T  QL++
Sbjct: 1172 PSYRPPSTTNHW--QTKTTTSTTTRPTTTVSQLID 1204


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 502 VSCCLFAATFGLCSSIESWPG 440
           +SC  F   +  C++  SWPG
Sbjct: 19  LSCKDFDTLYRDCTTASSWPG 39


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 629 LVFRYSVNVRFLCHSPGFGRFGTFIRAFD 543
           L FRY VN     HS       T+I A D
Sbjct: 133 LGFRYLVNDELSAHSKEIRGENTYILALD 161


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 629 LVFRYSVNVRFLCHSPGFGRFGTFIRAFD 543
           L FRY VN     HS       T+I A D
Sbjct: 447 LGFRYLVNDELSAHSKEIRGENTYILALD 475


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 517 VSQGSLKMMSKALIKVPNL 573
           V+QG+LK  +   +K PNL
Sbjct: 74  VNQGNLKKFNALKLKNPNL 92


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +2

Query: 206 YGPRYSDGTTLQVGVKSYVNWNPNSLFPSTVTSKK*DLMVARALSSLKNWGKR 364
           YGP  S     +  VK  +   P+  +    +SKK      R++  +   GKR
Sbjct: 203 YGPEKSASIPKKKEVKEEIEDEPDHKWKKNDSSKKKTRYYYRSVDDVIEKGKR 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,812
Number of Sequences: 336
Number of extensions: 4564
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)