Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0419.Seq
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0626 - 5445676-5446687,5447099-5447430                           29   5.7  
06_03_0754 + 24190778-24191284,24191735-24191784,24192311-241923...    28   7.5  
03_01_0149 - 1175689-1176258,1176345-1176509,1176631-1177539,117...    28   9.9  

>08_01_0626 - 5445676-5446687,5447099-5447430
          Length = 447

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/50 (24%), Positives = 26/50 (52%)
 Frame = +3

Query: 498 ETKNGIGKPRKSKDDVKSPDKGSKSPKTWTVTEETDIY*ISENKPYFHIM 647
           E KN + +  + +D  +  D  +++ + W V +  D + I+EN P   ++
Sbjct: 259 EDKNDVVEEEEDEDMDEGEDDENETNEEWEVRKNKDAFAIAENMPELRLL 308


>06_03_0754 +
           24190778-24191284,24191735-24191784,24192311-24192383,
           24192577-24192717,24193635-24194039,24194215-24194319,
           24194635-24194775,24195330-24195533,24196206-24196292,
           24196689-24196800,24197972-24198015
          Length = 622

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 104 GITPFPYKVAKALDPDIYRNIEFDVWSEMRRELRYGP 214
           G++    + A  LDPD++ N     W E +   +Y P
Sbjct: 521 GVSDVQAESATCLDPDLFTNFLIPSWFEAQGPTKYNP 557


>03_01_0149 - 1175689-1176258,1176345-1176509,1176631-1177539,
            1178179-1178378,1178505-1178605,1178747-1179369,
            1179451-1179546,1179637-1179798,1179889-1180068,
            1180173-1180323,1180408-1180641,1180753-1180913,
            1181041-1181163,1181261-1181421,1181655-1181877,
            1181952-1182346,1182461-1182671,1183536-1184522
          Length = 1883

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +2

Query: 26   NRSLIQLENVCLNCLNINSAKDLFDNGITPFPYKVAKALDPDI 154
            N   I+L    +NC+N+ ++KD F   ++ F       LD ++
Sbjct: 955  NSQFIKLYMYSVNCVNVGTSKDPFVTQLSNFAIIFGNELDAEV 997


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,947,749
Number of Sequences: 37544
Number of extensions: 501518
Number of successful extensions: 1265
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)