Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0419.Seq
         (797 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.5  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              23   2.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.3  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   4.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   7.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 191 RRELRYGPRYSDGTTLQVGVKSYVNWNPNSLFPST 295
           R E+R  PRY D T   V   S ++     L PST
Sbjct: 455 RYEVRCYPRYDDATNATVIQTSELSATFKGLKPST 489


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 185 EMRRELRYGPRYSDGTTLQVGVKSYVNWNPNSLFPSTVTSK 307
           ++R++L      S GTT+  G+   +     +L PST+  K
Sbjct: 63  DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 103


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 506 FRFMLPICCNIW 471
           F+ MLP CC  W
Sbjct: 359 FKLMLPNCCGKW 370


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 425 GAHGLTCSKGRGSSC 381
           G HGL+ S   GSSC
Sbjct: 142 GLHGLSSSAPTGSSC 156


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 782 SQGAGARKPNRPXPGLQSTISRIC 711
           S G  ARK   P P  Q  +  +C
Sbjct: 167 SDGCDARKKKGPTPRQQEELCLVC 190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,554
Number of Sequences: 438
Number of extensions: 5839
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)