Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0417.Seq
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   6.5  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   6.5  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 404 HVMIHLRSSGHDAVDVVVIFFNFTSVPLC 318
           ++ IH+RS   D  D +V+ + F    LC
Sbjct: 298 YLFIHIRSRQED-TDTLVVIYTFNLFYLC 325


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 404 HVMIHLRSSGHDAVDVVVIFFNFTSVPLC 318
           ++ IH+RS   D  D +V+ + F    LC
Sbjct: 254 YLFIHIRSRQED-TDTLVVIYTFNLFYLC 281


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 309 PEATQRYRRKVEKDDNYINCVMSTAPEMDHYVLQNNAIDMY 431
           P     +R K   DDN +    +++ E  HYV  +   D +
Sbjct: 802 PGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQGEDRW 842


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 309 PEATQRYRRKVEKDDNYINCVMSTAPEMDHYVLQNNAIDMY 431
           P     +R K   DDN +    +++ E  HYV  +   D +
Sbjct: 802 PGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQGEDRW 842


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 309 PEATQRYRRKVEKDDNYINCVMSTAPEMDHYVLQNNAIDMY 431
           P     +R K   DDN +    +++ E  HYV  +   D +
Sbjct: 802 PGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQGEDRW 842


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 309 PEATQRYRRKVEKDDNYINCVMSTAPEMDHYVLQNNAIDMY 431
           P     +R K   DDN +    +++ E  HYV  +   D +
Sbjct: 802 PGCFSLFRGKALMDDNVMKKYTTSSSEARHYVQYDQGEDRW 842


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
 Frame = +2

Query: 380 CSGDGSLRAPKQRHRHVPNVLCRNAIYARTGTHQLS-HCER 499
           C     L +  + H +V    CR+  YA    H L  H  R
Sbjct: 268 CVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIHLRR 308


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
 Frame = +2

Query: 380 CSGDGSLRAPKQRHRHVPNVLCRNAIYARTGTHQLS-HCER 499
           C     L +  + H +V    CR+  YA    H L  H  R
Sbjct: 26  CVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIHLRR 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,528
Number of Sequences: 336
Number of extensions: 3885
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)