Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0417.Seq
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    29   0.22 
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        27   0.67 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   0.67 
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   3.6  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    24   4.7  
AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical prote...    24   4.7  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 28.7 bits (61), Expect = 0.22
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +1

Query: 184  HQPTQHTPFYSENNANTIRTDYSSQERTTRKVGG-LKMSASSIPKPHS--GTDVKLKKMT 354
            HQ  QH    + +N+N +    S   R     GG LKM  SS   P S    DV +  + 
Sbjct: 831  HQQQQHHQPSAVSNSNGLARHNSKSRRLITATGGMLKMPPSSNSSPSSYPSPDVVISGLA 890

Query: 355  TTSTASCPLL 384
            + +++S  L+
Sbjct: 891  SNNSSSSNLV 900


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 27.1 bits (57), Expect = 0.67
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 348 DDNYINCVMSTAPEMDHYVLQNNAIDMYRTYYAEM 452
           D ++ N V +T  E+   V+QN+ ID  R+YY ++
Sbjct: 72  DTSFGNAVSNTKRELSS-VIQNDNIDHTRSYYKQL 105


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 27.1 bits (57), Expect = 0.67
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 59   QYSKKRCRFGGQPQFCEQGPEMC 127
            QY++K C    Q Q+ EQG ++C
Sbjct: 1958 QYTEKECPVKYQAQYVEQGDKIC 1980


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 27/114 (23%), Positives = 38/114 (33%), Gaps = 1/114 (0%)
 Frame = +1

Query: 91  SASVLRAGPGDVRQIATNVVEHKNFILRNPXHQPTQHTPFYSENN-ANTIRTDYSSQERT 267
           S S+LR GP         +  H+    R P H   +  P  S N   +T   DYS +   
Sbjct: 190 SESILRVGP------EKKITCHR---CRKPGHMK-RDCPMESNNTPTSTTMRDYSRKNEN 239

Query: 268 TRKVGGLKMSASSIPKPHSGTDVKLKKMTTTSTASCPLLRRWIITCSKTTPSTC 429
               GG + S    PK       +        +      + WII    T+   C
Sbjct: 240 CSSSGGQRESLKPKPKGKVAKSSEFSFTVGVVSKKREQPKSWIIDSGATSHMCC 293


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 125  TSPGPARRTEADHRNGIVS*NTDT 54
            T+P PA+ T  D  NG+ +  ++T
Sbjct: 949  TAPAPAKTTSTDSTNGLETPTSET 972


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +2

Query: 404 APKQRHRHVPNVLCRNAIYARTGTHQLSHCERVSR 508
           A  + H H    + R   +A++  H+L H +  +R
Sbjct: 22  AEHREHLHESGFVRRQGSHAKSSVHKLCHAKNTTR 56


>AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical protein
           protein.
          Length = 89

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +2

Query: 404 APKQRHRHVPNVLCRNAIYARTGTHQLSHCERVSR 508
           A  + H H    + R   +A++  H+L H +  +R
Sbjct: 22  AEHREHLHESGFVRRQGSHAKSSVHKLCHAKNTTR 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,008
Number of Sequences: 2352
Number of extensions: 17173
Number of successful extensions: 102
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)