Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0417.Seq
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83120-6|CAB76722.1|  809|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z82083-6|CAB04974.1|  388|Caenorhabditis elegans Hypothetical pr...    31   0.96 
AF016672-5|AAB66120.1|  951|Caenorhabditis elegans Hypothetical ...    30   2.2  
AF016672-4|AAD47126.1|  968|Caenorhabditis elegans Hypothetical ...    30   2.2  
U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical pr...    29   5.1  
U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AF045642-11|AAC02584.1|  443|Caenorhabditis elegans Hypothetical...    28   6.7  
U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fus...    28   8.9  
EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell f...    28   8.9  
AC199169-14|ABO33249.1|  389|Caenorhabditis elegans Hypothetical...    28   8.9  

>Z83120-6|CAB76722.1|  809|Caenorhabditis elegans Hypothetical
           protein R06A4.9 protein.
          Length = 809

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +3

Query: 402 VLQNNAIDMYRTYYAEMPSMPELERISCRTVNVYREVMERKRREPVSSICWQPDG 566
           +LQ   I +Y+ Y     S P++  + C      R  M  K + PV S+CW P+G
Sbjct: 94  ILQQPDI-LYQQYAVPADSTPDVP-VDCILTKFIRTAMN-KVKCPVYSVCWSPEG 145


>Z82083-6|CAB04974.1|  388|Caenorhabditis elegans Hypothetical
           protein ZK1010.8 protein.
          Length = 388

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 474 RISCRTVNVYREVMERKRREPVSSICWQPDGGQRFRSHLHRRGTFNRXARRP 629
           R+S   ++   +   R+RR  VS I   P+  +R + H HR  +++R    P
Sbjct: 172 RLSGSLISTRPKHSRRRRRNHVSKIYLDPNDARRHQKHHHRSHSYSRPVAPP 223


>AF016672-5|AAB66120.1|  951|Caenorhabditis elegans Hypothetical
           protein F56D12.6b protein.
          Length = 951

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = +3

Query: 312 EATQRYRRKVEKDDNYINCVMSTAPEMDHYVLQNNAID-MYRTYYAEMPSMPELERISCR 488
           E  Q  + ++  +D Y+  +  +  ++ HY+   ++ID M+      M  M E+  +  +
Sbjct: 19  EVAQFVKERLSVEDEYVKAINRSVNKVSHYIQNGSSIDAMWLLTKGTMELMAEIHVMLVK 78

Query: 489 TV-NVYREVMERK 524
            + ++ REV++ K
Sbjct: 79  NLQDLSREVLKYK 91


>AF016672-4|AAD47126.1|  968|Caenorhabditis elegans Hypothetical
           protein F56D12.6a protein.
          Length = 968

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = +3

Query: 312 EATQRYRRKVEKDDNYINCVMSTAPEMDHYVLQNNAID-MYRTYYAEMPSMPELERISCR 488
           E  Q  + ++  +D Y+  +  +  ++ HY+   ++ID M+      M  M E+  +  +
Sbjct: 36  EVAQFVKERLSVEDEYVKAINRSVNKVSHYIQNGSSIDAMWLLTKGTMELMAEIHVMLVK 95

Query: 489 TV-NVYREVMERK 524
            + ++ REV++ K
Sbjct: 96  NLQDLSREVLKYK 108


>U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical
           protein F49E10.2a protein.
          Length = 790

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
 Frame = +1

Query: 229 NTIRTDYSSQERTTRKVGGLKMSASSIPKPHSGTDVKLKKMTT-TSTASCPLLRRWIITC 405
           +T+    S+   TT+K        S+ P   + T     K TT TST++         T 
Sbjct: 581 STVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTT 640

Query: 406 SKTTPSTCTERTMQK--CHLCQNWNA 477
           + TTP   T  T +K      Q W A
Sbjct: 641 ATTTPQPTTTTTSEKPVTLTTQTWTA 666


>U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical
           protein F49E10.2b protein.
          Length = 842

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
 Frame = +1

Query: 229 NTIRTDYSSQERTTRKVGGLKMSASSIPKPHSGTDVKLKKMTT-TSTASCPLLRRWIITC 405
           +T+    S+   TT+K        S+ P   + T     K TT TST++         T 
Sbjct: 581 STVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTT 640

Query: 406 SKTTPSTCTERTMQK--CHLCQNWNA 477
           + TTP   T  T +K      Q W A
Sbjct: 641 ATTTPQPTTTTTSEKPVTLTTQTWTA 666


>AF045642-11|AAC02584.1|  443|Caenorhabditis elegans Hypothetical
           protein C17H12.5 protein.
          Length = 443

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +1

Query: 247 YSSQERTTRKVGGLKMSASSIPKPHSGTDVKLKKMTTTSTASCPLLRRWIITCS 408
           + ++++  +  G L+ +AS+      G+  K+KK    ++  CPLL     TC+
Sbjct: 24  WKTKKKDKKGTGKLRKTASNASLKKHGSTHKIKKPEDITSDGCPLLLTASDTCA 77


>U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fusion
           failure protein1 protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 157 KNFILRNPXHQPTQHTPFYSENN-ANTIRTDYSSQERT 267
           KNF+LR   +  T +    S+NN   +++ D SS+E T
Sbjct: 325 KNFVLRGTQYNDTYNERRVSDNNFVRSVKVDESSREIT 362


>EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell
           fusion failure-1 protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 157 KNFILRNPXHQPTQHTPFYSENN-ANTIRTDYSSQERT 267
           KNF+LR   +  T +    S+NN   +++ D SS+E T
Sbjct: 325 KNFVLRGTQYNDTYNERRVSDNNFVRSVKVDESSREIT 362


>AC199169-14|ABO33249.1|  389|Caenorhabditis elegans Hypothetical
           protein F38A1.1 protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 386 RSSGHDAVDVVVIFFNFTSVPLCG 315
           + +G DA+ +V  F+N   +P+CG
Sbjct: 285 KKAGSDALQMVEKFYNSNKIPICG 308


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,517,987
Number of Sequences: 27780
Number of extensions: 366848
Number of successful extensions: 1264
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)