Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0413.Seq
         (299 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    21   7.6  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    21   7.6  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -1

Query: 194 C*PHDAIIRLSHPSDSPTDNIHFRCVSSTTCGGVYVSNH 78
           C  H ++  +S      T N      +S +C GV  S H
Sbjct: 22  CSCHSSVCAVSFVMQCSTCNAPTDSANSVSCAGVCGSKH 60


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 73  CTEAWSLAWMRRL 35
           C++A   AWMRRL
Sbjct: 298 CSKAEKPAWMRRL 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,639
Number of Sequences: 2352
Number of extensions: 4193
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)