Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0412.Seq
(832 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub... 159 6e-40
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.61
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 29 0.81
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha... 28 1.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.9
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.9
SPAC23H3.09c |gly1||threonine aldolase |Schizosaccharomyces pomb... 27 2.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 2.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.3
SPCC4B3.06c |||NADPH-dependent FMN reductase |Schizosaccharomyce... 27 4.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 4.3
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 27 4.3
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 26 5.7
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 26 7.5
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 25 10.0
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 10.0
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 25 10.0
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 25 10.0
SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor Vma6|S... 25 10.0
>SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha
subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 159 bits (385), Expect = 6e-40
Identities = 80/183 (43%), Positives = 110/183 (60%), Gaps = 2/183 (1%)
Frame = +3
Query: 219 QHEKRGDIR--NQAYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKI 392
+H+K ++ + ++ +K+D P+T +T + L LYE++ +RR+E A LYK K
Sbjct: 45 EHDKPFPVKLDDSVFEGYKIDV-PSTEIEVTKGELLGLYEKMVTIRRLELACDALYKAKK 103
Query: 393 IRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGWTYSWALVCWXXXXXXXXXXXXXX 572
IRGFCHL GQEAVA G+ A+ DS+IT+YRCHG+ Y+ L
Sbjct: 104 IRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGELMGRQCGAS 163
Query: 573 XXXXXXMHLYGRNFYGGNGIVGAQVPLGAGVGFAHK*RGDGGVTFALYGDGAANQGSTLR 752
MH++ +NFYGGNGIVGAQ+PLGAG+GFA K TFALYGDGA+NQG
Sbjct: 164 KGKGGSMHIFAKNFYGGNGIVGAQIPLGAGIGFAQKYLEKPTTTFALYGDGASNQGQAFE 223
Query: 753 SLH 761
+ +
Sbjct: 224 AFN 226
Score = 39.1 bits (87), Expect = 8e-04
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 736 RGQLFEAYTV*TM-GLACVFVCENNGYGMGTT 828
+GQ FEA+ + + GL +F CENN YGMGT+
Sbjct: 218 QGQAFEAFNMAKLWGLPVIFACENNKYGMGTS 249
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.61
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Frame = -1
Query: 730 AAPSPYRANVTPPSPRYLWAKPTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRP 551
A P P + PP P A P P P+ AP +P P + P + P PV P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPS-VAAPPVPAPSSGIPP---VPKPAAGVPPVPPP 1194
Query: 550 DQLREHPQHTNAHE*VHP*QRY-AVITESASRIAALIPTATA 428
+ P+ + V P V T SA +PTA A
Sbjct: 1195 SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 730 AAPSPYRANVTPPSPRYLWAKPTPAPNGTCAPTIPLP 620
A P P + PP P A P P P+ AP +P+P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPS-VAAPPVPVP 1136
Score = 27.5 bits (58), Expect = 2.5
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = -1
Query: 730 AAPSPYRANVTPPSPRYLWAKPTPAPNGTCAPTIPLP---P*KLRPYKCMEPPLPREQPV 560
A P P + PP P A P P P+ AP +P P P +P PP+P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPS-VAAPPVPAPSGAPPVPKP-SVAAPPVPAPSSG 1177
Query: 559 LRP 551
+ P
Sbjct: 1178 IPP 1180
Score = 27.1 bits (57), Expect = 3.3
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 739 PWLAAPSPYRANVTPPSPRY-LWAKPTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQP 563
P +AAP + PP P+ + A P PAP+ + P +P P + P PP P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS-SGIPPVPKPAAGVPPV----PPPSEAPP 1199
Query: 562 VLRP 551
V +P
Sbjct: 1200 VPKP 1203
Score = 27.1 bits (57), Expect = 3.3
Identities = 22/75 (29%), Positives = 29/75 (38%)
Frame = -1
Query: 739 PWLAAPSPYRANVTPPSPRYLWAKPTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPV 560
P A P P + PP P A P P P+ P +P+P K P P E P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG-LPPVPVPTAKAPPV----PAPSSEAPS 1248
Query: 559 LRPDQLREHPQHTNA 515
+ + H+NA
Sbjct: 1249 VSTPRSSVPSPHSNA 1263
Score = 25.8 bits (54), Expect = 7.5
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = -1
Query: 739 PWLAAPSPYRANVTPPSPRYLWAKPTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPV 560
P P P ++ P P A P PAP+G P +P P PP+P+
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG--IPPVPKP-------SVAAPPVPKPSVA 1110
Query: 559 LRP 551
+ P
Sbjct: 1111 VPP 1113
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 29.1 bits (62), Expect = 0.81
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 186 DCTGCSDKRKIQHEKRGDIRNQAYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETA 365
D ++KR+++H+K+ R QA L + QG S+ + + +K +E ++ A
Sbjct: 476 DLDDSAEKRRVEHQKQLASRKQAEGLQRFAQGSVPSSGI-EKPTVKRFESYKRDSQLPQA 534
Query: 366 SGNL 377
G L
Sbjct: 535 IGEL 538
>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/82 (26%), Positives = 40/82 (48%)
Frame = +1
Query: 91 INLGFIEIIIDKMSKLIPSAAKFLAGNTITKVTAPVVATNAKYSTKKEATFEIKPTNSIN 270
I++ F + ++D + K+ + A+F N K PVV+ ++ + K F+ KP
Sbjct: 355 ISIPFQKDMLDTVVKVFSADARFEINNESQKTGEPVVSVVKRFVSDK--IFK-KPITVNE 411
Query: 271 WIRALQHQPHSLLKMLLSCMNN 336
W L +Q + + +M L NN
Sbjct: 412 W-WDLGNQVYKIRQMFLELWNN 432
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 745 VDPWLAAPSPYRANVTPPSPRYLWAKPTPAPNGTCAPTIPLPP 617
V P AAP A PP P + P+ P P+ P PP
Sbjct: 1692 VRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 4.3
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = -1
Query: 727 APSPYRANVTPPSPRYLWAKPTPAPNG--TCAPTIPLPP*KLRPYKCMEPPLPR-EQPVL 557
APS + V PP+P + A P G T AP P P + P +P P +
Sbjct: 1438 APSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSM 1497
Query: 556 RPDQLREHP 530
P ++ P
Sbjct: 1498 IPSVAQQPP 1506
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 667 PTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQP 563
P P P A +IPLPP + PP PR P
Sbjct: 339 PPPPPRSNAAGSIPLPP---QGRSAPPPPPPRSAP 370
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -1
Query: 730 AAPSPYRANVTPPSPRYLWAKPTPAPNGTCAPTIPLP 620
A P P A + PP P + A P P P P P
Sbjct: 446 APPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
>SPAC23H3.09c |gly1||threonine aldolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 376
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 400 PRMIFSLYRFPDAVSILRNIV 338
PR++F + PDAV IL+N++
Sbjct: 332 PRIVFHIQITPDAVEILKNVL 352
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -1
Query: 721 SPYRANVTPPSPRY---LWAKPTPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRP 551
+P R ++ PPSP + +K P P+ P P P K P P LP P + P
Sbjct: 143 APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP---SAPSLPSAVPPMPP 199
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 739 PWLAAPSPYRANVTPPSPRYLWAKPTPAPNGTCAPTIPLP 620
PW AA + ++ + P+P WAKP + AP+ P P
Sbjct: 408 PWAAASTSVSSSTSSPAP---WAKPA----SSAAPSNPAP 440
>SPCC4B3.06c |||NADPH-dependent FMN reductase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 200
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +1
Query: 121 DKMSKLIPSAAKFLAGNTITKVTAPVVATNAKYSTKKEATFEIKPTNSINWIRALQHQP 297
+K+ K+ P + G+ +K P +AT K+E F+ + + +W ++ +P
Sbjct: 5 EKLLKITPKILVIM-GSVRSKRLCPTIATWVGEMGKRETNFDYEKVDLTDWPLSMSDEP 62
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 724 PSPYRANVTPPSPRYLWAKPTPAPNGTCAPTIPLPP 617
P+P V PP+P P P P G P PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 26.6 bits (56), Expect = 4.3
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2
Query: 663 LQLPTGPAHQQSRCHHRSCVRTNAWNLPCPGSNRSCAPISSESTPSTLTP 514
LQ P P HR ++NLP + S S+ S STLTP
Sbjct: 92 LQDPQTPNTPPVSSQHRRFFSEGSFNLPNSNMSHSLNGDSTASNSSTLTP 141
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 607 ATSMVATGLLVRRSRWELEWASPTSNAATGESRSLC 714
A + ++TGLL +R +W L W +N + + + C
Sbjct: 127 AVTSLSTGLLSKREKWSL-WEGNLTNPRSEQPHTPC 161
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 690 DGGVTFALYGDGAANQGSTLRSLHSLNYGT 779
+GG T A+ GDG A RS++ N T
Sbjct: 12 NGGTTVAIAGDGFAILAGDTRSVNGYNINT 41
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 25.4 bits (53), Expect = 10.0
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +3
Query: 261 LHKLDQGPATSATLTSEDALKLYEQ---LT-ILRRIETASGNLYKEKI 392
LH L + P ++TLT+E AL+ E LT E + G Y++ I
Sbjct: 204 LHSLSEPPTPASTLTAEAALEDCESNLPLTETFSNFEVSLGTRYRKNI 251
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 697 PPSPRYLWAKPTPAPNGTCAPTIPLPP 617
PP PR L A+ + +G +PT PP
Sbjct: 227 PPKPRRLAARTSSNSSGVSSPTSVPPP 253
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 402 NHG*SFLYIGFLMRFQSSAISSVVHTA*EHLQ 307
N+G S L I LM + + +V+HTA +H+Q
Sbjct: 147 NYGLSILSIHALMCVECECLLNVIHTA-QHMQ 177
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 402 NHG*SFLYIGFLMRFQSSAISSVVHTA*EHLQ 307
N+G S L I LM + + +V+HTA +H+Q
Sbjct: 147 NYGLSILSIHALMCVECECLLNVIHTA-QHMQ 177
>SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor
Vma6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 710 SERDSPVAALLVGEAHSSSQRDLRTNNPVATI 615
S+ +S + +L HS+SQ DLR + V+T+
Sbjct: 402 SQNESIESNVLFPGNHSNSQTDLRNGDAVSTV 433
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,260,285
Number of Sequences: 5004
Number of extensions: 65720
Number of successful extensions: 248
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 408446760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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